Pre_GI: BLASTP Hits

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Query: NC_007951:3631772:3639253 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3639253, End: 3640167, Length: 915

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010645:558974:573802573802574725924Bordetella avium 197N, complete genome2-aminophenol 1,6-dioxygenase beta subunit1e-161568
NC_007951:3631772:363839636383963639208813Burkholderia xenovorans LB400 chromosome 1, complete sequence2-aminophenol 1,6-dioxygenase, alpha subunit1e-1894
NC_010645:558974:574760574760575572813Bordetella avium 197N, complete genome2-aminophenol 1,6-dioxygenase alpha subunit2e-1789.7
NC_011083:1173802:119570111957011196552852Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1582.8
NC_011094:1127983:114964611496461150497852Salmonella enterica subsp. enterica serovar Schwarzengrund str3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1582.8
NC_011205:1147556:116947311694731170324852Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1582.8
NC_016810:1126693:114729711472971148148852Salmonella enterica subsp. enterica serovar Typhimurium str3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1582.8
NC_016856:1128715:114931911493191150170852Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S4-hydroxyphenylacetate catabolism3e-1582.8
NC_016857:1126693:114729711472971148148852Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/744-hydroxyphenylacetate catabolism3e-1582.8
NC_017046:1127325:114755411475541148405852Salmonella enterica subsp. enterica serovar Typhimurium str. 7983,4-dihydroxyphenylacetate 2,3-dioxygenase3e-1582.8
NC_003198:1078113:110106311010631101914852Salmonella enterica subsp. enterica serovar Typhi str. CT18,3,4-dihydroxyphenylacetate 2,3-dioxygenase8e-1581.3
NC_012962:1068102:107120010712001072078879Photorhabdus asymbiotica, complete genomehomoprotocatechuate dyoxygenase1e-1480.9
NC_012034:390273:4119454119454133451401Anaerocellum thermophilum DSM 6725, complete genomeAMMECR1 domain protein6e-1168.6
NC_014722:193500:212943212943213794852Burkholderia rhizoxinica HKI 454, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-0964.3
NC_012632:638347:659116659116659889774Sulfolobus islandicus M.16.27 chromosome, complete genomeextradiol ring-cleavage dioxygenase class III protein subunit B7e-0961.6
NC_012623:1631985:164986316498631650636774Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeextradiol ring-cleavage dioxygenase class III protein subunit B1e-0860.8
NC_017275:594951:615799615799616572774Sulfolobus islandicus HVE10/4 chromosome, complete genomeExtradiol ring-cleavage dioxygenase class III, subunit B5e-0858.5
NC_012726:641763:662852662852663625774Sulfolobus islandicus M.16.4 chromosome, complete genomeextradiol ring-cleavage dioxygenase class III protein subunit B5e-0858.5