Pre_GI: BLASTP Hits

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Query: NC_007951:3631772:3635592 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3635592, End: 3636401, Length: 810

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015136:912276:927357927357928166810Burkholderia sp. CCGE1001 chromosome 1, complete sequence2-oxopent-4-enoate hydratase7e-97353
NC_011666:1572487:159618215961821596976795Methylocella silvestris BL2, complete genome4-oxalocrotonate decarboxylase6e-80297
NC_009512:3251545:326685632668563267662807Pseudomonas putida F1, complete genome4-oxalocrotonate decarboxylase7e-80296
NC_014118:987889:100352110035211004318798Burkholderia sp. CCGE1002 chromosome chromosome 2, complete2-oxopent-4-enoate hydratase1e-73276
NC_009921:3384116:339976933997693400635867Frankia sp. EAN1pec, complete genome4-oxalocrotonate decarboxylase4e-68258
NC_011662:2320100:235137723513772352162786Thauera sp. MZ1T, complete genome2-oxopent-4-enoate hydratase5e-66251
NC_007973:1411714:143483514348351435623789Ralstonia metallidurans CH34 chromosome 1, complete sequenceHydratase/decarboxylase2e-65249
NC_007348:2519447:252177825217782522560783Ralstonia eutropha JMP134 chromosome 2, complete sequence4-oxalocrotonate decarboxylase4e-64244
NC_021171:2019755:204179920417992042578780Bacillus sp. 1NLA3E, complete genome2-hydroxypenta-2,4-dienoate hydratase7e-64243
NC_018697:505915:519330519330520115786Cycloclasticus sp. P1 chromosome, complete genome2-hydroxypent-2,4-dienoate hydratase2e-63242
NC_016604:3137694:314834131483413149144804Mycobacterium rhodesiae NBB3 chromosome, complete genome2-keto-4-pentenoate hydratase6e-62237
NC_008699:2294361:230041623004162301231816Nocardioides sp. JS614, complete genome4-oxalocrotonate decarboxylase2e-61235
NC_010125:2813653:282691828269182827715798Gluconacetobacter diazotrophicus PAl 5, complete genomeputative 2-keto-4-pentenoate hydratase2e-61235
NC_016147:1788219:180330618033061804088783Pseudoxanthomonas spadix BD-a59 chromosome, complete genome2-hydroxypenta-2,4-dienoate hydratase1e-60233
NC_009328:3241166:325479832547983255583786Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-hydroxypenta-2,4-dienoate hydratase2e-59229
NC_016147:1825827:183918318391831839965783Pseudoxanthomonas spadix BD-a59 chromosome, complete genome2-hydroxypenta-2,4-dienoate hydratase3e-59228
NC_007503:1111457:113832611383261139114789Carboxydothermus hydrogenoformans Z-2901, complete genomehydratase/decarboxylase family protein3e-56218
NC_016887:511034:531050531050531835786Nocardia cyriacigeorgica GUH-2, complete genome2-keto-4-pentenoate hydratase 3 (2-hydroxypentadienoic acid hydratase )3e-53208
NC_016582:2069677:207209920720992072893795Streptomyces bingchenggensis BCW-1 chromosome, complete genome2-oxopent-4-enoate hydratase4e-53207
NC_008146:4936262:493828149382814939066786Mycobacterium sp. MCS, complete genome4-oxalocrotonate decarboxylase5e-53207
NC_008705:4975402:497742149774214978206786Mycobacterium sp. KMS, complete genome4-oxalocrotonate decarboxylase5e-53207
NC_016947:1480282:148972514897251490522798Mycobacterium intracellulare MOTT-02 chromosome, complete genome4-oxalocrotonate decarboxylase5e-53207
NC_009077:5286275:528627552862755287060786Mycobacterium sp. JLS, complete genome4-oxalocrotonate decarboxylase8e-53207
NC_014831:2133060:213626121362612137052792Thermaerobacter marianensis DSM 12885 chromosome, complete genome2-oxopent-4-enoate hydratase2e-52206
NC_017506:1100679:114030911403091141094786Marinobacter adhaerens HP15 chromosome, complete genomehydratase/decarboxylase2e-52206
NC_015565:2027279:204694720469472047720774Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete2-oxopent-4-enoate hydratase1e-50199
NC_014974:1076565:110214911021491102925777Thermus scotoductus SA-01 chromosome, complete genome2-keto-4-pentenoate hydratase3e-50198
NC_009077:4419084:444432444443244445118795Mycobacterium sp. JLS, complete genome4-oxalocrotonate decarboxylase6e-49194
NC_016584:593954:608817608817609590774Desulfosporosinus orientis DSM 765 chromosome, complete genome2-keto-4-pentenoate hydratase6e-49194
NC_015573:649800:649800649800650582783Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome2-oxopent-4-enoate hydratase1e-46186
NC_017192:2505369:252665725266572527445789Arcobacter sp. L, complete genome4-oxalocrotonate decarboxylase1e-44179
NC_014722:193500:214070214070215044975Burkholderia rhizoxinica HKI 454, complete genome2-oxo-hepta-3-ene-1,7-dioic acid hydratase3e-42172
NC_020829:1840281:184028118402811841063783Pseudomonas denitrificans ATCC 13867, complete genomeputative 2-hydroxypent-2,4-dienoate hydratase5e-41167
NC_016147:1788219:180411318041131804901789Pseudoxanthomonas spadix BD-a59 chromosome, complete genome4-oxalocrotonate decarboxylase1e-39163
NC_011892:352652:375312375312376091780Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completefumarylacetoacetate (FAA) hydrolase2e-39162
NC_010645:1341475:135604913560491356852804Bordetella avium 197N, complete genome2-oxo-hept-3-ene-1,7-dioate hydratase2e-39162
NC_007973:1411714:143199414319941432782789Ralstonia metallidurans CH34 chromosome 1, complete sequenceHydratase/decarboxylase4e-39161
NC_018697:505915:522091522091522882792Cycloclasticus sp. P1 chromosome, complete genome4-oxalocrotonate decarboxylase NahK4e-38158
NC_017506:1100679:114310411431041143898795Marinobacter adhaerens HP15 chromosome, complete genomehydratase/decarboxylase5e-38157
NC_009328:3241166:325205532520553252837783Geobacillus thermodenitrificans NG80-2 chromosome, complete genome4-oxalocrotonate decarboxylase2e-36152
NC_016109:2629301:264083126408312641631801Kitasatospora setae KM-6054, complete genomeputative 2-hydroxypenta-2,4-dienoate hydratase1e-33143
NC_007348:2519447:252258625225862523377792Ralstonia eutropha JMP134 chromosome 2, complete sequence4-oxalocrotonate decarboxylase3e-33142
NC_016947:1480282:149051914905191491304786Mycobacterium intracellulare MOTT-02 chromosome, complete genome4-oxalocrotonate decarboxylase1e-29130
NC_014298:251783:267689267689268456768Halalkalicoccus jeotgali B3 plasmid 1, complete sequence2-oxopent-4-enoate hydratase1e-29130
NC_009077:4419084:444354244435424444327786Mycobacterium sp. JLS, complete genome4-oxalocrotonate decarboxylase4e-29128
NC_007951:3631772:363483136348313635595765Burkholderia xenovorans LB400 chromosome 1, complete sequence4-oxalocrotonate decarboxylase2e-27122
NC_016582:2069677:207487720748772075656780Streptomyces bingchenggensis BCW-1 chromosome, complete genome4-oxalocrotonate decarboxylase9e-27120
NC_011666:1572487:159895415989541599718765Methylocella silvestris BL2, complete genome4-oxalocrotonate decarboxylase1e-23110
NC_015136:912276:928163928163928930768Burkholderia sp. CCGE1001 chromosome 1, complete sequence4-oxalocrotonate decarboxylase3e-23108
NC_009921:3384116:340425834042583404767510Frankia sp. EAN1pec, complete genomeHydratase/decarboxylase7e-22104
NC_004193:375416:445317445317446099783Oceanobacillus iheyensis HTE831, complete genome2-hydroxypenta-2,4-dienoate hydratase8e-22104
NC_011894:79282:110557110557111354798Methylobacterium nodulans ORS 2060, complete genomefumarylacetoacetate (FAA) hydrolase7e-1891.3
NC_015634:959396:983132983132983893762Bacillus coagulans 2-6 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase9e-1580.9
NC_016023:267581:267581267581268342762Bacillus coagulans 36D1 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase2e-1376.3
NC_014974:1076565:109993010999301100625696Thermus scotoductus SA-01 chromosome, complete genome4-oxalocrotonate decarboxylase3e-1375.9
NC_016582:10227196:102599971025999710260311315Streptomyces bingchenggensis BCW-1 chromosome, complete genome2-keto-4-pentenoate hydratase2e-1169.7
NC_016027:123853:132256132256133017762Gluconacetobacter xylinus NBRC 3288, complete genome2-oxopent-4-enoate hydratase2e-1169.7
NC_010557:316000:326651326651327454804Burkholderia ambifaria MC40-6 chromosome 3, complete sequence2-keto-4-pentenoate hydratase-like protein9e-0960.8
NC_016604:2944555:295784729578472958521675Mycobacterium rhodesiae NBB3 chromosome, complete genomehypothetical protein6e-0858.2
NC_014831:2133060:213407221340722134818747Thermaerobacter marianensis DSM 12885 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase7e-0857.8
NC_019892:2684793:268775126877512688314564Singulisphaera acidiphila DSM 18658 chromosome, complete genome2e-0653.1