Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2929804 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2929804, End: 2932452, Length: 2649

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019973:6102442:6107832610783261113503519Mesorhizobium australicum WSM2073, complete genomesuperfamily II helicase0855
NC_009446:174951:1815521815521849443393Dichelobacter nodosus VCS1703A, complete genomeDEAD-DEAH box helicase domain-containing protein VrlS1e-45185
NC_015500:2866027:2874262287426228773483087Treponema brennaborense DSM 12168 chromosome, complete genomeDEAD/DEAH box helicase domain protein8e-41169
NC_013515:715009:7481577481577512553099Streptobacillus moniliformis DSM 12112, complete genomeDEAD/DEAH box helicase domain protein1e-40169
NC_009997:2352948:2369163236916323723573195Shewanella baltica OS195, complete genomeDEAD/DEAH box helicase domain protein9e-36152
NC_014253:142026:1803571803571825582202Methanohalobium evestigatum Z-7303 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein3e-33144
NC_016884:1201868:1210037121003712130603024Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeDEAD/DEAH box helicase2e-31138
NC_015757:2459424:2465204246520424682273024Sulfobacillus acidophilus TPY chromosome, complete genomeSKI2-family helicase2e-31138
NC_020829:2754203:2764299276429927672832985Pseudomonas denitrificans ATCC 13867, complete genomeDEAD/DEAH box helicase6e-31136
NC_008698:435885:4504834504834527022220Thermofilum pendens Hrk 5, complete genomeDEAD/DEAH box helicase domain protein9e-30132
NC_000868:834872:8474058474058495522148Pyrococcus abyssi GE5, complete genomeski2-like helicase1e-28129
NC_015977:3011177:3022825302282530260643240Roseburia hominis A2-183 chromosome, complete genomehypothetical protein5e-28127
NC_002578:877609:8969148969148989382025Thermoplasma acidophilum DSM 1728, complete genomeski2-like helicase9e-28126
NC_015680:663341:6893096893096914472139Pyrococcus yayanosii CH1 chromosome, complete genomeski2-like helicase9e-28126
NC_008095:5527707:5540692554069255442523561Myxococcus xanthus DK 1622, complete genomeATP-dependent helicase, DEAD/DEAH box family2e-27125
NC_009076:3765441:3798020379802038016703651Burkholderia pseudomallei 1106a chromosome I, complete sequencehelicase, C-terminal:dead/deah box helicase, n-terminal4e-27124
NC_009050:427000:4302924302924339033612Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDEAD/DEAH box helicase domain protein2e-26122
NC_019791:638500:6490656490656511852121Caldisphaera lagunensis DSM 15908 chromosome, complete genomesuperfamily II helicase5e-25117
NC_007513:632884:6343206343206371002781Synechococcus sp. CC9902, complete genomeDEAD/DEAH box helicase-like5e-24114
NC_012588:211633:2155952155952177422148Sulfolobus islandicus M.14.25 chromosome, complete genomeDEAD/DEAH box helicase9e-24112
NC_010995:4525119:4539346453934645425793234Cellvibrio japonicus Ueda107, complete genomeDEAD/DEAH box helicase4e-23110
NC_007516:1847745:1863063186306318658372775Synechococcus sp. CC9605, complete genomeDEAD/DEAH box helicase-like8e-23109
NC_005070:617448:6174486174486201772730Synechococcus sp. WH 8102, complete genomeputative DNA helicase1e-22109
NC_009482:1652329:1665788166578816685682781Synechococcus sp. RCC307 chromosome, complete genomesuperfamily II RNA helicase2e-22108
NC_015312:1265797:1328324132832413318363513Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-22107
NC_014297:1:2182621826241622337Halalkalicoccus jeotgali B3 chromosome, complete genomeDEAD/DEAH box helicase domain protein1e-20102
NC_016582:1:1555515555183622808Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDEAD/DEAH box helicase1e-20102
NC_013887:17160:3427134271363582088Methanocaldococcus sp. FS406-22 chromosome, complete genomeDEAD/DEAH box helicase domain protein2e-20101
NC_010524:824145:8326328326328359643333Leptothrix cholodnii SP-6, complete genomeDEAD/DEAH box helicase domain protein3e-20101
NC_014961:445717:4477564477564499002145Desulfurococcus mucosus DSM 2162 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-20100
NC_009635:94937:9493794937987343798Methanococcus aeolicus Nankai-3 chromosome, complete genomeDEAD/DEAH box helicase1e-1999
NC_009921:8147947:8168399816839981720913693Frankia sp. EAN1pec, complete genomeDEAD/DEAH box helicase domain protein2e-1998.6
NC_007005:6056765:6067600606760060712173618Pseudomonas syringae pv. syringae B728a, complete genomeHelicase, C-terminal:DEAD/DEAH box helicase, N-terminal3e-1998.2
NC_013158:1620761:1641383164138316437852403Halorhabdus utahensis DSM 12940, complete genomeDEAD/DEAH box helicase domain protein5e-1997.1
NC_008435:4530797:4531744453174445354393696Rhodopseudomonas palustris BisA53, complete genomeDEAD/DEAH box helicase domain protein1e-1896.3
NC_019973:6028795:6032486603248660354973012Mesorhizobium australicum WSM2073, complete genomesuperfamily II helicase5e-1894
NC_015675:6651899:6658197665819766612083012Mesorhizobium opportunistum WSM2075 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-1894
NC_014834:2264108:2266244226624422693483105Rhodopseudomonas palustris DX-1 chromosome, complete genomeDEAD/DEAH box helicase6e-1893.6
NC_019673:2051363:2127995212799521310783084Saccharothrix espanaensis DSM 44229 complete genomeDEAD/DEAH box helicase domain-containing protein2e-1791.7
NC_013929:3299736:3332673333267333358193147Streptomyces scabiei 87.22 chromosome, complete genomehelicase3e-1791.3
NC_010086:1816378:1822888182288818259023015Burkholderia multivorans ATCC 17616 chromosome 2, completeDEAD/DEAH box helicase domain protein1e-1689
NC_008435:2658986:2755266275526627582863021Rhodopseudomonas palustris BisA53, complete genomeDEAD/DEAH box helicase domain protein4e-1687.4
NC_008701:1039304:1040055104005510421752121Pyrobaculum islandicum DSM 4184, complete genomeDEAD/DEAH box helicase domain protein6e-1687
NC_015633:1702000:1719470171947017219952526Vibrio anguillarum 775 chromosome chromosome I, complete sequenceATP-dependent DNA helicase5e-1584
NC_014623:9038177:9042672904267290452992628Stigmatella aurantiaca DW4/3-1 chromosome, complete genomedead/deah box helicase domain-containing protein5e-1584
NC_016906:181254:1876541876541912293576Gordonia polyisoprenivorans VH2 chromosome, complete genomeDEAD/DEAH box helicase5e-1584
NC_016932:1309644:1317974131797413205142541Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHelicase C-terminal domain-containing protein1e-1482.8
NC_003551:793046:7945607945607970162457Methanopyrus kandleri AV19, complete genomeArchaea-specific Superfamily II helicase1e-1482.8
NC_017303:1328777:1333111133311113356512541Corynebacterium pseudotuberculosis I19 chromosome, complete genomehypothetical protein1e-1482.4
NC_017301:1328500:1332970133297013355102541Corynebacterium pseudotuberculosis C231 chromosome, completehypothetical protein1e-1482.4
NC_017031:1328500:1333089133308913356292541Corynebacterium pseudotuberculosis P54B96 chromosome, completehypothetical protein1e-1482.4
NC_017305:1326351:1330684133068413332212538Corynebacterium pseudotuberculosis PAT10 chromosome, completehypothetical protein2e-1482
NC_014393:2868846:2868846286884628713472502Clostridium cellulovorans 743B chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein3e-1481.3
NC_012912:1701231:1710394171039417126702277Dickeya zeae Ech1591, complete genomehelicase domain protein3e-1481.3
NC_010334:2615260:2629510262951026317862277Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein3e-1481.3
NC_013730:5914142:5921962592196259249763015Spirosoma linguale DSM 74, complete genomeDEAD/DEAH box helicase domain protein7e-1480.1
NC_014329:1328949:1333283133328313346621380Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein9e-1479.7
NC_002935:1237585:1240851124085112436432793Corynebacterium diphtheriae NCTC 13129, complete genomePutative helicase3e-1378.2
NC_016790:1177349:1181416118141611842082793Corynebacterium diphtheriae VA01 chromosome, complete genomeputative helicase3e-1377.8
NC_016788:1214026:1214026121402612168182793Corynebacterium diphtheriae HC04 chromosome, complete genomeputative helicase4e-1377.8
NC_016783:1239293:1240483124048312432752793Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative helicase4e-1377.8
NC_016802:1212726:1213916121391612167082793Corynebacterium diphtheriae HC02 chromosome, complete genomeputative helicase2e-1275.5
NC_013959:1059004:1084443108444310871722730Sideroxydans lithotrophicus ES-1 chromosome, complete genomeDEAD/DEAH box helicase domain protein3e-1274.7
NC_015738:1768951:1768951176895117715362586Eggerthella sp. YY7918, complete genomehypothetical protein4e-1274.3
NC_016790:1345638:1391331139133113938652535Corynebacterium diphtheriae VA01 chromosome, complete genomeputative helicase6e-1273.6
NC_016788:1376000:1418728141872814212622535Corynebacterium diphtheriae HC04 chromosome, complete genomeputative helicase6e-1273.6
NC_016787:1350676:1415263141526314177972535Corynebacterium diphtheriae HC03 chromosome, complete genomeputative helicase6e-1273.6
NC_016943:1422926:1437021143702114389431923Blastococcus saxobsidens DD2, complete genomeputative helicase1e-1172.8
NC_016786:1359064:1423950142395014264842535Corynebacterium diphtheriae HC01 chromosome, complete genomeputative helicase2e-1172.4
NC_016782:1385800:1423685142368514262192535Corynebacterium diphtheriae 241 chromosome, complete genomeputative helicase2e-1172.4
NC_016799:1439000:1475495147549514780292535Corynebacterium diphtheriae 31A chromosome, complete genomeputative helicase2e-1172.4
NC_016800:1411000:1451826145182614543602535Corynebacterium diphtheriae BH8 chromosome, complete genomeputative helicase2e-1172.4
NC_002935:1378566:1435342143534214378762535Corynebacterium diphtheriae NCTC 13129, complete genomePutative helicase2e-1172
NC_016783:1397975:1444277144427714468112535Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative helicase3e-1171.6
NC_016789:1432000:1469188146918814717222535Corynebacterium diphtheriae PW8 chromosome, complete genomeputative helicase5e-1170.5
NC_010334:1701957:1712142171214217146552514Shewanella halifaxensis HAW-EB4, complete genomehelicase domain protein9e-1169.7
NC_003413:37233:5895358953614632511Pyrococcus furiosus DSM 3638, complete genomeputative ATP dependent RNA helicase2e-1068.6
NC_016801:1422500:1465479146547914680132535Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative helicase2e-1068.6
NC_000911:3478000:3493885349388534969053021Synechocystis sp. PCC 6803, complete genomeantiviral protein2e-1068.2
NC_017039:3474500:3490529349052934935493021Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeantiviral protein2e-1068.2
NC_017052:3474500:3490518349051834935383021Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeantiviral protein2e-1068.2
NC_017277:3475500:3491518349151834945383021Synechocystis sp. PCC 6803, complete genomeantiviral protein2e-1068.2
NC_015474:487517:4887154887154912822568Pyrococcus sp. NA2 chromosome, complete genomeATP-dependent RNA helicase, putative4e-1067.4
NC_013174:1366786:1379902137990213827542853Jonesia denitrificans DSM 20603, complete genomeDEAD/DEAH box helicase domain protein6e-1067
NC_011283:1811000:1824430182443018266282199Klebsiella pneumoniae 342 chromosome, complete genomehelicase1e-0965.9
NC_012804:611444:6156266156266182622637Thermococcus gammatolerans EJ3, complete genomeDEAD/DEAH box RNA helicase2e-0965.5
NC_012559:1497548:1508696150869615108372142Laribacter hongkongensis HLHK9, complete genomeSuperfamily II helicase2e-0965.5
NC_008321:3964414:3973198397319839753512154Shewanella sp. MR-4, complete genomeDEAD/DEAH box helicase domain protein5e-0963.9
NC_014323:5051041:5059892505989250624652574Herbaspirillum seropedicae SmR1 chromosome, complete genomeDNA helicase8e-0963.2
NC_012029:45462:5685156851589052055Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeDEAD/DEAH box helicase domain protein1e-0862.8
NC_013521:2193203:2201802220180222043602559Sanguibacter keddieii DSM 10542, complete genomesuperfamily II helicase1e-0862.8
NC_015680:1315040:1319137131913713216652529Pyrococcus yayanosii CH1 chromosome, complete genomeDEAD/DEAH box RNA helicase2e-0862
NC_015948:2367000:2374592237459223771982607Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeDEAD/DEAH box helicase domain-containing protein3e-0861.2
NC_015410:2258800:2270898227089822730902193Pseudomonas mendocina NK-01 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-0860.8
NC_015562:1708000:1720253172025317226582406Methanotorris igneus Kol 5 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein5e-0860.5
NC_013093:2471574:2494410249441024974002991Actinosynnema mirum DSM 43827, complete genomeDEAD/DEAH box helicase domain protein8e-0860.1
NC_008595:2432184:2432184243218424349902807Mycobacterium avium 104, complete genome6e-0860.1
NC_014666:8198554:8199435819943582020112577Frankia sp. EuI1c chromosome, complete genomeProtein of unknown function DUF35161e-0759.3
NC_007777:2638580:2638580263858026412372658Frankia sp. CcI3, complete genomeDEAD/DEAH box helicase-like1e-0759.3
NC_016943:1422926:1439883143988314416251743Blastococcus saxobsidens DD2, complete genomeputative helicase (fragment)1e-0759.3
NC_008278:4023918:4055173405517340578092637Frankia alni ACN14a, complete genomeputative ATP-dependent helicase1e-0759.3
NC_009050:427000:4364524364524390582607Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDEAD/DEAH box helicase domain protein2e-0758.9
NC_015683:1467000:1471509147150914740492541Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-0758.5
NC_017317:1463466:1467810146781014703502541Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein2e-0758.5
NC_015565:624298:6454396454396477752337Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDEAD/DEAH box helicase domain-containing protein2e-0758.5
NC_015697:506494:5064945064945091062613Lactobacillus reuteri SD2112 chromosome, complete genomehypothetical protein2e-0758.5
NC_014815:2363460:2365169236516923676732505Micromonospora sp. L5 chromosome, complete genomedead/deah box helicase domain protein2e-0758.5
NC_016785:1357500:1401837140183714043712535Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative helicase3e-0758.2
NC_009380:2548878:2548878254887825516852808Salinispora tropica CNB-440 chromosome, complete genomeDSH domain-containing protein3e-0758.2
NC_009953:2727669:2727669272766927304372769Salinispora arenicola CNS-205 chromosome, complete genomeDEAD/DEAH box helicase3e-0758.2
NC_016584:954000:9723979723979749432547Desulfosporosinus orientis DSM 765 chromosome, complete genomesuperfamily II helicase3e-0758.2
NC_016802:1317365:1408476140847614110102535Corynebacterium diphtheriae HC02 chromosome, complete genomeputative helicase3e-0758.2
NC_014638:1139824:1159636115963611621942559Bifidobacterium bifidum PRL2010 chromosome, complete genomehelicase4e-0757.8
NC_007164:1090858:1114959111495911176312673Corynebacterium jeikeium K411, complete genomeputative helicase1e-0656.2
NC_014623:4683671:4708241470824147097761536Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA/RNA helicase1e-0656.2
NC_012590:850130:8675268675268724694944Corynebacterium aurimucosum ATCC 700975, complete genomeputative ATP-dependent DNA helicase1e-0655.8
NC_016801:1255611:1259677125967712624692793Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative helicase4e-0654.7
NC_020209:4312892:4319205431920543218352631Pseudomonas poae RE*1-1-14, complete genomedead/deah box helicase domain-containing protein4e-0654.3
NC_016799:1268706:1269896126989612726882793Corynebacterium diphtheriae 31A chromosome, complete genomeputative helicase4e-0654.3
NC_016785:1193471:1194661119466111974532793Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative helicase4e-0654.3
NC_016789:1257392:1258582125858212613742793Corynebacterium diphtheriae PW8 chromosome, complete genomeputative helicase4e-0654.3
NC_016800:1243000:1243013124301312458052793Corynebacterium diphtheriae BH8 chromosome, complete genomeputative helicase4e-0654.3
NC_018720:993869:9938699938699964332565Bifidobacterium asteroides PRL2011 chromosome, complete genomehelicase6e-0653.5
NC_008639:2545107:2552272255227225544042133Chlorobium phaeobacteroides DSM 266, complete genomeDEAD/DEAH box helicase domain protein8e-0653.1
NC_019962:3577846:3581488358148835835542067Natrinema pellirubrum DSM 15624, complete genomeDNA/RNA helicase, superfamily II8e-0653.1
NC_008782:2568027:2579272257927225818422571Acidovorax sp. JS42, complete genomeDEAD/DEAH box helicase domain protein9e-0653.1