Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2924557 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2924557, End: 2925426, Length: 870

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016002:1975000:200077120007712001643873Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein5e-88324
NC_002947:4167500:421165242116524212611960Pseudomonas putida KT2440, complete genomehypothetical protein1e-70266
NC_012997:2941627:296992829699282970815888Teredinibacter turnerae T7901, complete genomehypothetical protein5e-68258
NC_007946:4875997:488494848849484885826879Escherichia coli UTI89, complete genomehypothetical protein7e-62237
NC_008253:4817864:482544648254464826324879Escherichia coli 536, complete genomehypothetical protein2e-61235
NC_012917:1840172:187525318752531876137885Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein7e-55214
NC_012796:1600600:1621962162196216230141053Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-20100
NC_018750:5078705:508848450884845089422939Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein4e-2099
NC_013194:761166:766754766754767683930Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein3e-1892.8
NC_013194:4964000:499087049908704991799930Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completehypothetical protein3e-1892.8
NC_015152:2549756:259662825966282597521894Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein1e-1687.4
NC_014623:3136340:315623231562323157131900Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-1478.2
NC_011891:3369170:337905833790583379330273Anaeromyxobacter dehalogenans 2CP-1, complete genomehypothetical protein2e-1376.6
NC_014666:300571:3108323108323122201389Frankia sp. EuI1c chromosome, complete genomehypothetical protein6e-1375.1
NC_010682:460523:470844470844471803960Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein9e-1374.3
NC_016818:1795576:180041918004191801414996Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completerestriction endonuclease8e-1167.8
NC_011751:2327014:232990923299092330904996Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1067.4
NC_016845:3448881:348481634848163485811996Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1067.4
NC_012724:2682154:268779026877902688563774Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein5e-1065.5
NC_017186:6395435:6442310644231064433411032Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein7e-0754.7
NC_014318:6395392:6442266644226664432971032Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein7e-0754.7