Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2921660 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2921660, End: 2924008, Length: 2349

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:690056:7142527142527165672316Enterobacter cloacae SCF1 chromosome, complete genomeATP-dependent endonuclease01023
NC_011206:262844:2789572789572812782322Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP-dependent endonuclease, OLD family9e-176617
NC_013132:5250385:5272842527284252751842343Chitinophaga pinensis DSM 2588, complete genomeATP-dependent endonuclease, OLD family4e-165582
NC_009076:3765441:3791874379187437935141641Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein2e-163576
NC_015138:2069739:2080545208054520829532409Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein5e-162572
NC_009441:4328035:4346439434643943488202382Flavobacterium johnsoniae UW101 chromosome, complete genomeATP-dependent OLD family endonuclease1e-127457
NC_008463:5313527:5348012534801253504352424Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-121437
NC_008686:1383891:1409683140968314119172235Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein2e-68260
NC_007946:289425:2996222996223017692148Escherichia coli UTI89, complete genomehypothetical protein1e-67258
NC_002516:2113186:2120225212022521222221998Pseudomonas aeruginosa PAO1, complete genomehypothetical protein5e-64246
NC_007651:3064530:3116914311691431192682355Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein2e-63244
NC_015379:908904:9647329647329669302199Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein1e-62241
NC_015733:3736104:3759442375944237617392298Pseudomonas putida S16 chromosome, complete genomehypothetical protein5e-62239
NC_015422:2806832:2827485282748528295092025Alicycliphilus denitrificans K601 chromosome, complete genomeATP-dependent OLD family endonuclease5e-62239
NC_015730:1918000:1924944192494419271842241Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein6e-53209
NC_011901:2983555:2988278298827829903022025Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeATP-dependent OLD family endonuclease5e-48193
NC_018866:1328623:1339251133925113413712121Dehalobacter sp. DCA chromosome, complete genomehypothetical protein3e-46187
NC_019904:5308998:5319280531928053213012022Echinicola vietnamensis DSM 17526 chromosome, complete genomeOLD family ATP-dependent endonuclease2e-43177
NC_010338:4108280:4127866412786641299412076Caulobacter sp. K31, complete genomeconserved hypothetical membrane spanning protein5e-43176
NC_008542:197500:2275572275572296262070Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceATP-dependent endonuclease of the OLD family-like protein7e-40166
NC_013131:7945280:7983002798300279850112010Catenulispora acidiphila DSM 44928, complete genomeATP-dependent OLD family endonuclease1e-39165
NC_017030:9818064:9827517982751798295202004Corallococcus coralloides DSM 2259 chromosome, complete genomeATP-dependent OLD family endonuclease3e-36154
NC_013456:1843000:1849597184959718517412145Vibrio sp. Ex25 chromosome 1, complete genomepathogenesis related protein3e-31137
NC_007929:1637261:1647690164769016497292040Lactobacillus salivarius subsp. salivarius UCC118, complete genomehypothetical protein3e-26120
NC_017191:3841170:3852765385276538549362172Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein4e-1480.5
NC_017190:3879148:3910644391064439128152172Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein4e-1480.5
NC_017188:3839478:3851073385107338531782106Bacillus amyloliquefaciens TA208 chromosome, complete genometopoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase5e-1480.5
NC_007907:5185510:5270756527075652728822127Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1172
NC_011768:79297:8994689946919612016Desulfatibacillum alkenivorans AK-01, complete genomeSMC domain protein3e-0964.3
NC_003919:4618988:4636552463655246382341683Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-0963.2
NC_009659:1129066:1158048115804811598651818Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-0862.4
NC_007974:2048000:2083641208364120854371797Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative exonuclease3e-0861.2
NC_014311:3076519:3095153309515330969521800Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-0860.1
NC_014306:4106569:4116312411631241184472136Erwinia billingiae Eb661, complete genomehypothetical protein7e-0859.7
NC_015660:3328595:3345598334559833475441947Geobacillus thermoglucosidasius C56-YS93 chromosome, completeSMC domain-containing protein3e-0758.2
NC_009075:15017:2882528825306091785Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein8e-0653.1