Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2919786 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2919786, End: 2921663, Length: 1878

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:1643000:1647481164748116493581878Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein01129
NC_014618:690056:7165647165647184411878Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein0958
NC_009076:3765441:3793511379351137954061896Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein0638
NC_011206:262844:2812752812752831641890Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein1e-171603
NC_013132:5250385:5275205527520552770911887Chitinophaga pinensis DSM 2588, complete genomehypothetical protein6e-153541
NC_009441:4328035:4348817434881743507301914Flavobacterium johnsoniae UW101 chromosome, complete genomesuperfamily I DNA/RNA helicase-like protein7e-153541
NC_015138:2069739:2082950208295020848871938Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeUvrD/REP helicase5e-146518
NC_008463:5313527:5350432535043253523631932Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein5e-146518
NC_017025:1761918:1761918176191817637921875Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein4e-87322
NC_015730:1918000:1927195192719519291351941Roseobacter litoralis Och 149 chromosome, complete genomeDNA helicase-like protein2e-80300
NC_007651:3064530:3114998311499831169171920Burkholderia thailandensis E264 chromosome I, complete sequencepathogenesis-related protein7e-78292
NC_008686:1383891:1407734140773414096861953Paracoccus denitrificans PD1222 chromosome 1, complete sequencepathogenesis-related protein1e-75284
NC_007946:289425:2977872977872996251839Escherichia coli UTI89, complete genomehypothetical protein1e-75284
NC_015379:908904:9669279669279688011875Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein7e-74278
NC_015733:3736104:3761736376173637636071872Pseudomonas putida S16 chromosome, complete genomepathogenesis-like protein8e-73275
NC_015422:2806832:2825746282574628275031758Alicycliphilus denitrificans K601 chromosome, complete genomeUvrD/REP helicase1e-61238
NC_018866:1328623:1337548133754813392661719Dehalobacter sp. DCA chromosome, complete genomehypothetical protein2e-52207
NC_008542:197500:2296192296192313551737Burkholderia cenocepacia HI2424 chromosome 1, complete sequencehypothetical protein2e-50201
NC_019904:5308998:5317528531752853192731746Echinicola vietnamensis DSM 17526 chromosome, complete genomeDNA/RNA helicase1e-45185
NC_011901:2983555:2991824299182429935631740Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein7e-45182
NC_007929:1637261:1646014164601416477051692Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDNA helicase1e-44181
NC_017030:9818064:9829517982951798312741758Corallococcus coralloides DSM 2259 chromosome, complete genomeDNA helicase II2e-40167
NC_010338:4108280:4126107412610741278731767Caulobacter sp. K31, complete genomeDNA helicase II7e-40166
NC_013456:1843000:1851723185172318536271905Vibrio sp. Ex25 chromosome 1, complete genomeDNA helicase4e-27123
NC_008750:807446:8166548166548187892136Shewanella sp. W3-18-1, complete genomehypothetical protein3e-1894
NC_016816:1545354:1565539156553915675962058Pantoea ananatis LMG 5342, complete genomeUvrD/REP helicase5e-1893.2
NC_014551:3864127:3894087389408738956401554Bacillus amyloliquefaciens DSM 7, complete genomeDNA helicase II9e-1892.4
NC_002516:2113186:211703021170302117734705Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-1790.1
NC_015660:3328595:3343779334377933455871809Geobacillus thermoglucosidasius C56-YS93 chromosome, completeUvrD/REP helicase6e-1789.7
NC_003552:2634828:2646157264615726479951839Methanosarcina acetivorans C2A, complete genomeDNA helicase2e-1688.2
NC_010995:4460413:4468461446846144705782118Cellvibrio japonicus Ueda107, complete genomeUvrD/REP helicase3e-1687.4
NC_007907:5185510:5268982526898252707661785Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1584.7
NC_017190:3879148:390982039098203910659840Bacillus amyloliquefaciens LL3 chromosome, complete genomeDNA helicase II3e-1480.5
NC_014306:4106569:411844041184404119342903Erwinia billingiae Eb661, complete genomehypothetical protein4e-1067
NC_008262:2433979:2461165246116524634202256Clostridium perfringens SM101, complete genomeATP-dependent DNA helicase PcrA1e-0862
NC_011832:619874:6202246202246232833060Candidatus Methanosphaerula palustris E1-9c, complete genomeUvrD/REP helicase5e-0860.1
NC_014218:1437931:1439939143993914424492511Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeUvrD/REP helicase1e-0758.9