Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2914184 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2914184, End: 2915374, Length: 1191

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006513:1379735:1427026142702614281951170Azoarcus sp. EbN1, complete genomeputative transcriptional regulator6e-106384
NC_008358:263458:2770202770202781741155Hyphomonas neptunium ATCC 15444, complete genomeDNA-binding protein8e-84310
NC_015136:3127930:3148490314849031496501161Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein9e-48191
NC_015381:1623587:1632610163261016337641155Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein9e-46184
NC_007948:1972290:1993564199356419947241161Polaromonas sp. JS666, complete genomeprotein of unknown function DUF9552e-42173
NC_011891:1225000:1238780123878012400121233Anaeromyxobacter dehalogenans 2CP-1, complete genomehelix-turn-helix domain protein3e-37156
NC_008255:32455:4484744847459801134Cytophaga hutchinsonii ATCC 33406, complete genomezinc-related peptidase4e-0962.8
NC_015434:2657781:2679427267942726805181092Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0861.2
NC_009454:713892:7279337279337290001068Pelotomaculum thermopropionicum SI, complete genomehypothetical protein1e-0860.8
NC_015663:1356982:1364836136483613659241089Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-0860.5
NC_014837:33014:4755647556486411086Pantoea sp. At-9b chromosome, complete genomehypothetical protein9e-0858.2
NC_014652:420457:426575426575427342768Caldicellulosiruptor hydrothermalis 108 chromosome, completehypothetical protein1e-0654.7
NC_015942:722980:7337707337707349181149Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein2e-0653.9
NC_008027:4953432:4957720495772049588021083Pseudomonas entomophila L48, complete genomehypothetical protein5e-0652.4
NC_014364:1116439:1141492114149211426221131Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF9556e-0652.4
NC_020541:4122852:4144029414402941451441116Rhodanobacter sp. 2APBS1, complete genomeputative Zn peptidase6e-0652.4