Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2912815 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2912815, End: 2914191, Length: 1377

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006513:1379735:1425656142565614270291374Azoarcus sp. EbN1, complete genomehypothetical protein2e-66253
NC_008358:263458:2781712781712795411371Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein4e-45182
NC_007948:1972290:1994726199472619961261401Polaromonas sp. JS666, complete genomehypothetical protein2e-38160
NC_015381:1623587:1631205163120516326081404Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-37157
NC_015136:3127930:3149640314964031510221383Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein5e-36152
NC_014365:2843126:2853667285366728557572091Desulfarculus baarsii DSM 2075 chromosome, complete genomehypothetical protein5e-1272.8
NC_010510:409469:4120104120104133171308Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completehypothetical protein8e-1168.9
NC_020133:2421965:2436242243624224375041263Mycobacterium liflandii 128FXT, complete genomehypothetical protein9e-1065.5
NC_011891:1225000:1240009124000912413521344Anaeromyxobacter dehalogenans 2CP-1, complete genomePP-loop superfamily ATPase-like protein2e-0964.3
NC_008611:3579500:3585781358578135870431263Mycobacterium ulcerans Agy99, complete genomehypothetical protein7e-0962.4
NC_007973:2348481:2368681236868123699401260Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein2e-0861.2
NC_020181:5130513:5150006515000651512711266Enterobacter aerogenes EA1509E, complete genomeFIG014574: hypothetical protein2e-0757.8