Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2907679 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2907679, End: 2908506, Length: 828

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010338:426388:449396449396450157762Caulobacter sp. K31, complete genomeMltA-interacting MipA family protein1e-1583.6
NC_013722:1816561:184453818445381845365828Xanthomonas albilineans, complete genomeputative outer membrane protein2e-1583.6
NC_014307:1131241:115283511528351153662828Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein2e-1376.3
NC_007005:3684099:368782836878283688676849Pseudomonas syringae pv. syringae B728a, complete genomeMltA-interacting MipA6e-1374.7
NC_020211:689451:703813703813704532720Serratia marcescens WW4, complete genomeMltA-interacting MipA family protein9e-1374.3
NC_016514:1142607:117552911755291176365837Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane protein1e-1170.5
NC_018691:4619245:463120346312034632033831Alcanivorax dieselolei B5 chromosome, complete genomePutative MltA-interacting protein MipA3e-1169.3
NC_009959:55567:890289029714813Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequenceMltA-interacting MipA family protein1e-0964.3
NC_016818:2927500:293026629302662931102837Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeouter membrane protein V7e-0961.2
NC_007347:3612918:362751836275183628354837Ralstonia eutropha JMP134 chromosome 1, complete sequenceMltA-interacting MipA4e-0858.9
NC_008314:1202963:122052312205231221383861Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein V7e-0754.7