Pre_GI: BLASTP Hits

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Query: NC_007951:2904644:2904644 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2904644, End: 2905372, Length: 729

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:4178115:421564942156494216350702Polaromonas naphthalenivorans CJ2, complete genomeIntegral membrane protein TerC1e-32140
NC_009659:3520093:355101135510113551724714Janthinobacterium sp. Marseille chromosome, complete genomeTerC family integral membrane protein6e-32137
NC_015677:3965716:398395339839533984666714Ramlibacter tataouinensis TTB310 chromosome, complete genomemembrane protein2e-31136
NC_021066:3703725:371941837194183720101684Raoultella ornithinolytica B6, complete genomehypothetical protein6e-31134
NC_008752:5213431:522591252259125226598687Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegral membrane protein TerC2e-29129
NC_015138:5276857:529110452911045291790687Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeintegral membrane protein, YjbE family2e-29129
NC_011992:3615517:362779236277923628475684Acidovorax ebreus TPSY, complete genomeIntegral membrane protein TerC2e-29129
NC_010084:695817:719264719264719968705Burkholderia multivorans ATCC 17616 chromosome 1, completeintegral membrane protein TerC2e-29129
NC_007973:499606:500801500801501496696Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegral membrane protein TerC7e-29127
NC_010002:960027:963786963786964526741Delftia acidovorans SPH-1, complete genomeIntegral membrane protein TerC2e-28126
NC_015563:6357653:637588363758836376623741Delftia sp. Cs1-4 chromosome, complete genomeYjbE family integral membrane protein2e-28126
NC_015138:5276857:528020052802005280925726Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeintegral membrane protein, YjbE family9e-28123
NC_011000:1023800:104616010461601046864705Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein5e-26118
NC_015422:4822636:483684048368404837523684Alicycliphilus denitrificans K601 chromosome, complete genomeYjbE family integral membrane protein6e-26117
NC_011992:3615517:361965336196533620384732Acidovorax ebreus TPSY, complete genomeIntegral membrane protein TerC1e-25116
NC_015422:4822636:482462448246244825361738Alicycliphilus denitrificans K601 chromosome, complete genomeYjbE family integral membrane protein1e-24113
NC_012791:5496175:551339255133925514078687Variovorax paradoxus S110 chromosome 1, complete genomeIntegral membrane protein TerC6e-24110
NC_015563:6357653:636314063631406363832693Delftia sp. Cs1-4 chromosome, complete genomeYjbE family integral membrane protein8e-24110
NC_014931:6415940:643497364349736435656684Variovorax paradoxus EPS chromosome, complete genomeIntegral membrane protein TerC1e-23109
NC_010002:960027:973139973139973831693Delftia acidovorans SPH-1, complete genomeIntegral membrane protein TerC2e-23109
NC_008752:5213431:521752552175255218277753Acidovorax avenae subsp. citrulli AAC00-1, complete genomeIntegral membrane protein TerC3e-23108
NC_010337:1561430:156169015616901562346657Heliobacterium modesticaldum Ice1, complete genomeintegral membrane protein terc, putative1e-22107
NC_006510:591339:633215633215633907693Geobacillus kaustophilus HTA426, complete genomehypothetical protein8e-2097.4
NC_007973:2773427:279284727928472793545699Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegral membrane protein TerC6e-1890.9
NC_008781:4178115:418092141809214181637717Polaromonas naphthalenivorans CJ2, complete genomeIntegral membrane protein TerC1e-1686.7
NC_013524:171524:197632197632198375744Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeIntegral membrane protein TerC4e-1581.6
NC_008148:3024867:302892930289293029630702Rubrobacter xylanophilus DSM 9941, complete genomeIntegral membrane protein TerC2e-1376.3
NC_019892:7822000:783828478382847839084801Singulisphaera acidiphila DSM 18658 chromosome, complete genomeYkoY family integral membrane protein8e-1063.9
NC_016641:2700765:272182427218242722558735Paenibacillus terrae HPL-003 chromosome, complete genometerc7e-0857.8
NC_017249:4365935:437088843708884371517630Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-0651.2