Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:2087385:2110623 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2110623, End: 2110724, Length: 102

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014394:1325616:1333782133378213350351254Gallionella capsiferriformans ES-2 chromosome, complete genometransposase mutator type4e-0960.5
NC_009656:6224221:6231219623121962324451227Pseudomonas aeruginosa PA7 chromosome, complete genometransposase mutator family protein4e-0960.1
NC_009656:3127240:3175228317522831764541227Pseudomonas aeruginosa PA7 chromosome, complete genometransposase mutator family protein4e-0960.1
NC_011992:3375929:3383302338330233845281227Acidovorax ebreus TPSY, complete genometransposase mutator type2e-0857.8
NC_011992:3550566:3560780356078035620061227Acidovorax ebreus TPSY, complete genometransposase mutator type2e-0857.8
NC_009483:2489000:2514273251427325154871215Geobacter uraniireducens Rf4 chromosome, complete genometransposase, mutator type2e-0857.8
NC_009483:3644677:3665129366512936663431215Geobacter uraniireducens Rf4 chromosome, complete genometransposase, mutator type2e-0857.8
NC_009483:3331500:3345891334589133471051215Geobacter uraniireducens Rf4 chromosome, complete genometransposase, mutator type2e-0857.8
NC_014733:1073540:1082471108247110836881218Methylovorus sp. MP688 chromosome, complete genometransposase mutator family protein1e-0755.1
NC_015222:1749553:1753427175342717546561230Nitrosomonas sp. AL212 chromosome, complete genometransposase mutator type1e-0755.1
NC_008609:142471:150318150318151118801Pelobacter propionicus DSM 2379, complete genometransposase, mutator type9e-0752.4
NC_013960:1319349:133659913365991336703105Nitrosococcus halophilus Nc4 chromosome, complete genome1e-0548.9