Pre_GI: BLASTP Hits

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Query: NC_007951:2087385:2097831 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2097831, End: 2098151, Length: 321

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015660:1076159:108793410879341088275342Geobacillus thermoglucosidasius C56-YS93 chromosome, completehelix-turn-helix domain-containing protein1e-0858.5
NC_015660:1076159:108843510884351088677243Geobacillus thermoglucosidasius C56-YS93 chromosome, completehelix-turn-helix domain-containing protein1e-0652
NC_015675:6228000:623566362356636236037375Mesorhizobium opportunistum WSM2075 chromosome, complete genomeXRE family transcriptional regulator2e-0650.8
NC_019973:5601346:560995256099525610326375Mesorhizobium australicum WSM2073, complete genomeputative transcriptional regulator2e-0650.8
NC_014923:5666619:568099256809925681366375Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix domain protein2e-0650.8
NC_007948:1972290:1993564199356419947241161Polaromonas sp. JS666, complete genomeprotein of unknown function DUF9554e-0650.1
NC_016077:1278104:129394612939461294317372Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein6e-0649.7
NC_015136:3127930:3148490314849031496501161Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein7e-0649.3
NC_003212:2413824:244192224419222442404483Listeria innocua Clip11262, complete genomehypothetical protein9e-0648.9