Pre_GI: BLASTP Hits

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Query: NC_007951:1928906:1949079 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1949079, End: 1949564, Length: 486

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007953:1088933:110622111062211106748528Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, AsnC family1e-38158
NC_011002:772243:779052779052779591540Burkholderia cenocepacia J2315 chromosome 3, complete sequenceAnsC family regulatory protein2e-34144
NC_013855:964000:979471979471980028558Azospirillum sp. B510 plasmid pAB510a, complete sequencetranscriptional regulator4e-27120
NC_007974:1007834:102216010221601022630471Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AsnC family2e-23108
NC_008392:1029134:106648010664801066944465Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, AsnC family6e-1683.2
NC_015379:1600715:160762116076211608100480Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, MarR family3e-1374.3
NC_018000:1914945:196028919602891960765477Sinorhizobium fredii USDA 257 chromosome, complete genomeHTH-type transcriptional regulator y4sM3e-1374.3
NC_010125:2483122:250724825072482507733486Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, AsnC family6e-1373.2
NC_011365:738321:760563760563761000438Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeAsnC family transcriptional regulator6e-1373.2
NC_010322:5349000:539639353963935396869477Pseudomonas putida GB-1 chromosome, complete genomeAsnC family transcriptional regulator6e-1373.2
NC_006350:3865584:389425138942513894742492Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative AsnC-family transcriptional regulator3e-1270.9
NC_007651:3560652:359561335956133596071459Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, AsnC family4e-1270.9
NC_017986:1862408:188227918822791882632354Pseudomonas putida ND6 chromosome, complete genomeAsnC family transcriptional regulator4e-1270.5
NC_012997:3651993:366989736698973670379483Teredinibacter turnerae T7901, complete genometranscriptional regulator, AsnC family4e-1270.5
NC_010995:20181:455864558646134549Cellvibrio japonicus Ueda107, complete genometranscriptional regulator, AsnC family5e-1270.1
NC_009831:5107924:510792451079245108403480Shewanella sediminis HAW-EB3, complete genometranscriptional regulator, AsnC family6e-1269.7
NC_008061:2153495:218083421808342181436603Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AsnC family8e-1269.7
NC_012559:2663747:270361527036152704103489Laribacter hongkongensis HLHK9, complete genomeProbable transcriptional regulator, AsnC family1e-1168.9
NC_017059:2771085:279869727986972799185489Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator2e-1168.2
NC_011992:1179084:119139811913981191646249Acidovorax ebreus TPSY, complete genome5e-1167
NC_015594:489367:489367489367489846480Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeAsnC family transcriptional regulator1e-1065.9
NC_016830:6499234:652018565201856520655471Pseudomonas fluorescens F113 chromosome, complete genomeasnC family transcriptional regulator1e-1065.5
NC_005296:4574213:461335446133544613836483Rhodopseudomonas palustris CGA009, complete genomeputative leucine responsive transcriptional regulator LRP/BkdR, AsnC family1e-1065.5
NC_011004:4947980:496887949688794969361483Rhodopseudomonas palustris TIE-1, complete genometranscriptional regulator, AsnC family1e-1065.5
NC_010170:4409683:441720744172074417665459Bordetella petrii, complete genometranscriptional regulator, AsnC family1e-0962.4
NC_008463:3394000:341394834139483414421474Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative glutamate uptake regulatory protein1e-0962.4
NC_011770:3626000:364557236455723646045474Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator1e-0962.4
NC_007626:697926:716405716405716905501Magnetospirillum magneticum AMB-1, complete genomeTranscriptional regulator2e-0961.6
NC_012997:3185248:321158732115873212054468Teredinibacter turnerae T7901, complete genomeBkd operon transcriptional regulator3e-0961.2
NC_011144:2674242:269910226991022699581480Phenylobacterium zucineum HLK1, complete genometranscriptional regulator, AsnC family3e-0960.8
NC_012856:798922:806080806080806607528Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, AsnC family3e-0960.8
NC_008228:3608909:362285836228583623328471Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, AsnC family4e-0960.5
NC_015138:2364500:236482723648272365285459Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAsnC family transcriptional regulator5e-0960.5
NC_015379:3570658:358424935842493584749501Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcriptional regulatory protein8e-0959.7
NC_017075:3165858:319223231922323192711480Rubrivivax gelatinosus IL144, complete genomeAsnC family transcriptional regulator1e-0858.9
NC_011894:3161289:318203031820303182530501Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AsnC family2e-0858.2
NC_003909:927955:942926942926943420495Bacillus cereus ATCC 10987, complete genometranscriptional regulator, AsnC family3e-0857.8
NC_017506:1:649206492065507588Marinobacter adhaerens HP15 chromosome, complete genomeAsnC family transcriptional regulator5e-0857
NC_012721:182965:193446193446193925480Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AsnC family protein7e-0856.6
NC_007974:1007834:102370910237091024179471Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AsnC family7e-0856.2
NC_014500:443874:468107468107468589483Dickeya dadantii 3937 chromosome, complete genomeAsnC family transcriptional regulator1e-0755.8
NC_015638:1824794:184727818472781847751474Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeAsnC family transcriptional regulator2e-0754.7
NC_017082:532000:594181594181594645465Bradyrhizobium sp. S23321, complete genometranscriptional regulator3e-0754.3
NC_009256:2945059:298631529863152986815501Burkholderia vietnamiensis G4 chromosome 1, complete sequenceAsnC family transcriptional regulator3e-0754.3
NC_020244:2509000:254498325449832545495513Bacillus subtilis XF-1, complete genometranscriptional regulator (Lrp/AsnC family)3e-0754.3
NC_019896:1483073:149670214967021497175474Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetranscriptional regulator AzlB4e-0753.9
NC_015376:1431728:145021514502151450697483Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, AsnC family protein5e-0753.5
NC_014258:127500:131033131033131506474Pantoea vagans C9-1 plasmid pPag3, complete sequenceproline dehydrogenase transcriptional activator2e-0651.2
NC_008570:2014151:203693420369342037425492Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeleucine responsive regulatory protein2e-0651.2
NC_010505:1581429:159876315987631599248486Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, AsnC family3e-0650.8
NC_015376:3320818:335632633563263356808483Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AsnC family protein4e-0650.8
NC_018868:282738:300482300482300970489Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeleucine-responsive transcriptional regulator6e-0650.1
NC_016510:1999621:200193620019362002397462Flavobacterium columnare ATCC 49512 chromosome, complete genomeAsnC family transcriptional regulator7e-0649.7
NC_012912:4071859:410323041032304103754525Dickeya zeae Ech1591, complete genometranscriptional regulator, AsnC family7e-0649.7
NC_014121:4299500:430084243008424301294453Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein8e-0649.7