Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:1928906:1947679 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1947679, End: 1948197, Length: 519

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007952:3283394:331810233181023318620519Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein3e-57221
NC_013510:5499447:550380855038085504272465Thermomonospora curvata DSM 43183, complete genomeEndoribonuclease L-PSP1e-24112
NC_013526:65495:654956549565956462Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeEndoribonuclease L-PSP3e-24111
NC_013530:3365742:336850033685003368973474Xylanimonas cellulosilytica DSM 15894, complete genomeEndoribonuclease L-PSP2e-21102
NC_015957:10403997:104069241040692410407391468Streptomyces violaceusniger Tu 4113 chromosome, complete genomeendoribonuclease L-PSP3e-21101
NC_015588:2939747:294205429420542942524471Isoptericola variabilis 225 chromosome, complete genomeEndoribonuclease L-PSP4e-21100
NC_018750:3661243:366412936641293664599471Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein6e-21100
NC_008463:4743296:476456647645664765000435Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein1e-2099
NC_008711:3701635:370336237033623703898537Arthrobacter aurescens TC1, complete genomeputative endoribonuclease L-PSP family5e-2097.1
NC_006087:345976:364853364853365323471Leifsonia xyli subsp. xyli str. CTCB07, complete genometranslation initiation inhibitor1e-1995.9
NC_010655:2065567:207116120711612071631471Akkermansia muciniphila ATCC BAA-835, complete genomeEndoribonuclease L-PSP2e-1994.7
NC_008392:1029134:105403210540321054493462Burkholderia cepacia AMMD chromosome 3, complete sequenceEndoribonuclease L-PSP5e-1890.5
NC_011296:530408:532873532873533331459Thermodesulfovibrio yellowstonii DSM 11347, complete genomeendoribonuclease L-PSP8e-1889.7
NC_015684:3157941:318283331828333183285453Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein1e-1789
NC_011386:931140:941171941171941623453Oligotropha carboxidovorans OM5, complete genomeendoribonuclease L-PSP1e-1789
NC_009328:3241166:325712232571223257583462Geobacillus thermodenitrificans NG80-2 chromosome, complete genome2-aminomuconate deaminase3e-1788.2
NC_010557:679656:722460722460722921462Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceEndoribonuclease L-PSP2e-1788.2
NC_020300:675551:678459678459678923465Bartonella australis Aust/NH1, complete genomeendoribonuclease family protein3e-1787.8
NC_018870:2479114:248991124899112490369459Thermacetogenium phaeum DSM 12270 chromosome, complete genomeendoribonuclease L-PSP4e-1787.4
NC_013222:432947:450957450957451580624Robiginitalea biformata HTCC2501, complete genometranscription regulator6e-1787
NC_013446:2919005:293502729350272935521495Comamonas testosteroni CNB-2, complete genomeEndoribonuclease L-PSP2e-1685.1
NC_015677:2715912:272067527206752721130456Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein6e-1683.6
NC_018145:1089548:110534211053421105896555Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeendoribonuclease L-PSP3e-1581.3
NC_002516:891000:892386892386892820435Pseudomonas aeruginosa PAO1, complete genomehypothetical protein6e-1580.1
NC_007348:1903937:192264319226431923107465Ralstonia eutropha JMP134 chromosome 2, complete sequenceEndoribonuclease L-PSP1e-1479.3
NC_014006:63000:813198131981780462Sphingobium japonicum UT26S chromosome 1, complete genomeYjgF-family protein3e-1477.8
NC_015723:384000:398876398876399397522Cupriavidus necator N-1 chromosome 2, complete sequencetranslation initiation inhibitor YjgF-family5e-1477
NC_007509:1043602:106333710633371063825489Burkholderia sp. 383 chromosome 3, complete sequenceEndoribonuclease L-PSP8e-1166.2
NC_017082:6444522:644738064473806447802423Bradyrhizobium sp. S23321, complete genomeputative endoribonuclease-L-PSP family protein2e-1065.1
NC_013524:171524:194157194157194615459Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeEndoribonuclease L-PSP2e-1065.1