Pre_GI: BLASTP Hits

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Query: NC_007951:1711223:1730388 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1730388, End: 1730894, Length: 507

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014118:1559770:156386315638631564267405Burkholderia sp. CCGE1002 chromosome chromosome 2, completehypothetical protein6e-1166.6
NC_010623:188143:209021209021209308288Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein7e-1166.6
NC_009254:700891:713062713062713484423Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein2e-0961.6
NC_014118:1528851:154160315416031541995393Burkholderia sp. CCGE1002 chromosome chromosome 2, completehypothetical protein9e-0959.7
NC_010086:871723:896835896835897233399Burkholderia multivorans ATCC 17616 chromosome 2, completeconserved hypothetical protein2e-0858.5
NC_010805:1576735:157807115780711578469399Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein2e-0858.5
NC_010087:460591:476173476173476595423Burkholderia multivorans ATCC 17616 chromosome 3, completeconserved hypothetical protein4e-0857.4
NC_010801:421906:448263448263448685423Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein4e-0857.4
NC_007510:1959883:199699319969931997430438Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein6e-0857
NC_009254:74000:921199211992634516Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein4e-0754.3
NC_009254:745706:772434772434772856423Burkholderia vietnamiensis G4 chromosome 3, complete sequencehypothetical protein9e-0752.8
NC_010804:1334581:134954413495441349852309Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein1e-0652.8
NC_010084:2171881:217498721749872175229243Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein1e-0652.4