Pre_GI: BLASTP Hits

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Query: NC_007948:517893:537649 Polaromonas sp. JS666, complete genome

Start: 537649, End: 537846, Length: 198

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016610:1310275:1311001131100113126411641Tannerella forsythia ATCC 43037 chromosome, complete genomefumarate hydratase class I, anaerobic1e-0961.6
NC_009778:1902995:1902995190299519046411647Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0960.1
NC_012779:2281700:2284344228434422859901647Edwardsiella ictaluri 93-146, complete genomefumarate hydratase class I, anaerobic4e-0960.1
NC_010067:3247169:3250028325002832516741647Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0959.3
NC_008343:2020785:2036188203618820378401653Granulibacter bethesdensis CGDNIH1, complete genomefumarate hydratase9e-0958.9
CP002797:4411763:4411763441176344134091647Escherichia coli NA114, complete genomeFumarate hydratase class I2e-0857.8
NC_019968:8397:2957629576312251650Prevotella dentalis DSM 3688 chromosome 2, complete sequencehydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily2e-0857.8
NC_010694:2138000:2183060218306021847061647Erwinia tasmaniensis, complete genomeFumarase A3e-0857.4
NC_008800:4389687:4397629439762943992751647Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,fumarate hydratase class I, anaerobic3e-0857.4
NC_013855:964000:9872169872169889851770Azospirillum sp. B510 plasmid pAB510a, complete sequencefumarate hydratase, class I2e-0857.4
NC_020126:4622371:4652616465261646542471632Myxococcus stipitatus DSM 14675, complete genomefumarate hydratase, class I3e-0857
NC_015224:4314116:4321411432141143230571647Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,fumarate hydratase class I, anaerobic4e-0856.6
NC_012214:2221702:2271989227198922736351647Erwinia pyrifoliae Ep1/96, complete genomeFumarase A5e-0856.2
NC_015160:612000:6310286310286326381611Odoribacter splanchnicus DSM 20712 chromosome, complete genomehydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit8e-0855.8
NC_016001:364666:3679143679143695151602Flavobacterium branchiophilum, complete genomefumarate hydratase class I1e-0755.1
NC_011565:620801:6544006544006560281629Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,fumarate hydratase2e-0754.7
NC_020125:194691:2217722217722233791608Riemerella anatipestifer RA-CH-2, complete genomeTartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain protein1e-0652