Pre_GI: BLASTP Hits

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Query: NC_007948:4620661:4621821 Polaromonas sp. JS666, complete genome

Start: 4621821, End: 4622864, Length: 1044

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016590:1380092:1381197138119713823421146Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein3e-116418
NC_007948:4646344:4665793466579346668211029Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 11e-111403
NC_007948:4646344:4656182465618246572251044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 15e-109394
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein4e-67255
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein9e-67254
NC_007005:2686551:2706875270687527079271053Pseudomonas syringae pv. syringae B728a, complete genomeextracellular solute-binding protein, family 19e-61234
NC_008391:2404443:2414978241497824160241047Burkholderia cepacia AMMD chromosome 2, complete sequenceextracellular solute-binding protein, family 12e-50199
NC_016641:1148220:1148220114822011492931074Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein6e-24111
NC_006510:2044347:2055331205533120564371107Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)7e-24111
NC_014483:5015890:5018463501846350195361074Paenibacillus polymyxa E681 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein2e-23109
NC_014010:1850500:1899804189980419008741071Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeABC transporter substrate-binding protein6e-1788.6
NC_011985:194973:2123562123562133961041Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter2e-1687
NC_008054:1815723:1828034182803418290951062Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSpermidine/putrescine ABC transporter, substrate binding protein7e-1581.6
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family2e-0860.5
NC_013446:4723380:4749627474962747506761050Comamonas testosteroni CNB-2, complete genomeperiplasmic iron binding protein5e-0858.9
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein3e-0756.2
NC_015591:1161007:1178980117898011800831104Sinorhizobium meliloti AK83 chromosome 3, complete sequencefamily 1 extracellular solute-binding protein2e-0653.9
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein2e-0653.5
NC_020453:1025891:1032515103251510335611047Agromonas oligotrophica S58 DNA, complete genomeputative AttC protein2e-0653.5
NC_006177:2943259:2964845296484529659421098Symbiobacterium thermophilum IAM 14863, complete genomeiron ABC transporter substrate-binding protein2e-0653.5
NC_015591:1161007:1176700117670011778031104Sinorhizobium meliloti AK83 chromosome 3, complete sequencefamily 1 extracellular solute-binding protein6e-0652