Pre_GI: BLASTP Hits

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Query: NC_007948:360199:387538 Polaromonas sp. JS666, complete genome

Start: 387538, End: 387978, Length: 441

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:3091500:3108388310838831098031416Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-45180
NC_007614:2517226:2526538252653825279411404Nitrosospira multiformis ATCC 25196 chromosome 1, completehypothetical protein3e-45180
NC_009523:2769154:2772688277268827738691182Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein1e-1168.2
NC_013037:1072266:1087955108795510891931239Dyadobacter fermentans DSM 18053, complete genomeadenine-specific DNA methylase7e-1166.2
NC_018607:1134900:115173911517391152506768Brachyspira pilosicoli B2904 chromosome, complete genomemodification methylase8e-1062.8
NC_012030:345837:3556403556403570011362Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeadenine-specific DNA methylase2e-0961.2
NC_009767:5230790:5238059523805952395101452Roseiflexus castenholzii DSM 13941, complete genomeputative RNA methylase2e-0961.2
NC_013890:1142500:1153526115352611547821257Dehalococcoides sp. GT chromosome, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)3e-0960.5
NC_020387:1257163:1268633126863312698891257Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase3e-0960.5
NC_013552:1187299:1199281119928112005371257Dehalococcoides sp. VS, complete genomeadenine-specific DNA methylase3e-0960.5
NC_010943:1884695:1894288189428818957121425Stenotrophomonas maltophilia K279a, complete genomeputative modification methylase8e-0959.3
NC_016026:296951:3041113041113053041194Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein2e-0858.2
NC_013922:1628862:1641343164134316425871245Natrialba magadii ATCC 43099 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-0858.2
NC_005835:1773482:1786343178634317875751233Thermus thermophilus HB27, complete genomehypothetical protein3e-0857.4
NC_018604:1329228:1346064134606413476351572Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0857.4
NC_000909:1408276:1416977141697714185691593Methanocaldococcus jannaschii DSM 2661, complete genomemodification methylase, type II R/M system8e-0855.8
NC_015674:1114915:1125497112549711266781182Helicobacter bizzozeronii CIII-1, complete genomeDNA modification methylase2e-0754.7
NC_015573:2463123:2474839247483924761161278Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0753.9
NC_018870:1953748:1964306196430619659101605Thermacetogenium phaeum DSM 12270 chromosome, complete genomemjaIIM: modification methylase4e-0753.5
NC_008942:1706191:1714063171406317151631101Methanocorpusculum labreanum Z, complete genomecyclase family protein6e-0752.8
NC_015388:719669:7230887230887243621275Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeDNA methylase N-4/N-6 domain protein1e-0652
NC_009921:1736000:1751686175168617530771392Frankia sp. EAN1pec, complete genomeputative RNA methylase2e-0651.2
NC_009952:1984955:1999930199993020013781449Dinoroseobacter shibae DFL 12, complete genomeputative modification methylase6e-0649.7
NC_015146:144565:1560101560101578451836Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completeDNA modification methylase7e-0649.3