Pre_GI: BLASTP Hits

Some Help

Query: NC_007948:360199:370059 Polaromonas sp. JS666, complete genome

Start: 370059, End: 370943, Length: 885

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011297:787932:792900792900793781882Dictyoglomus thermophilum H-6-12, complete genomebranched-chain amino acid ABC transporter permease protein8e-22104
NC_013199:282901:298351298351299229879Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, permease component1e-21103
NC_013198:298000:316318316318317196879Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein1e-21103
NC_013740:15401:186611866119557897Acidaminococcus fermentans DSM 20731, complete genomeinner-membrane translocator1e-20100
NC_020291:6426704:644397764439776444852876Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter membrane protein 1, HAAT family1e-20100
NC_011661:961129:963759963759964640882Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator2e-20100
NC_008526:250000:268106268106268984879Lactobacillus casei ATCC 334, complete genomeBranched-chain amino acid ABC-type transport system, permease component1e-1997.1
NC_014334:267409:284947284947285825879Lactobacillus casei str. Zhang chromosome, complete genomebranched-chain amino acid ABC transporter permease1e-1997.1
NC_010999:252605:267378267378268256879Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, permease protein1e-1997.1
NC_008702:4064470:408740240874024088334933Azoarcus sp. BH72, complete genomeABC transporter permease protein8e-1994.4
NC_014831:2133060:217271721727172173625909Thermaerobacter marianensis DSM 12885 chromosome, complete genomeinner-membrane translocator7e-1891.3
NC_016147:2820232:282737228273722828250879Pseudoxanthomonas spadix BD-a59 chromosome, complete genomebranched chain amino acid ABC transporter permease8e-1891.3
NC_009255:1105786:114440311444031145356954Burkholderia vietnamiensis G4 chromosome 2, complete sequenceinner-membrane translocator2e-1789.7
NC_010086:1816378:187833118783311879284954Burkholderia multivorans ATCC 17616 chromosome 2, completeinner-membrane translocator2e-1789.7
NC_010805:575709:596023596023596973951Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system permease protein2e-1789.7
NC_009633:2137999:215979221597922160670879Alkaliphilus metalliredigens QYMF chromosome, complete genomeinner-membrane translocator2e-1789.7
NC_015499:119200:144015144015144923909Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, integral membrane subunit3e-1789.4
NC_007503:2010858:201588620158862016770885Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, permease protein3e-1789
NC_009617:3184924:321745232174523218336885Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator3e-1789
NC_010424:697187:701448701448702332885Candidatus Desulforudis audaxviator MP104C, complete genomeinner-membrane translocator5e-1788.6
NC_010676:2658495:267762626776262678576951Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator3e-1685.9
NC_002937:614000:618218618218619126909Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched-chain amino acid ABC transporter, permease protein5e-1685.1
NC_008751:2774000:279395427939542794862909Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeinner-membrane translocator5e-1685.1
NC_008785:914411:936609936609937559951Burkholderia mallei SAVP1 chromosome II, complete sequenceABC transporter, hydrophobic amino acid uptake transporter (HAAT) family, permease protein6e-1685.1
NC_010557:679656:691986691986692936951Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceinner-membrane translocator2e-1583.2
NC_012658:545840:548045548045548917873Clostridium botulinum Ba4 str. 657 chromosome, complete genomehigh-affinity branched-chain amino acid ABC transporter permease6e-1581.6
NC_008786:3323167:3347693334769333487091017Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator1e-1480.5
NC_012791:2233098:224756422475642248493930Variovorax paradoxus S110 chromosome 1, complete genomeinner-membrane translocator3e-1479.3
NC_008543:2035292:203657520365752037534960Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceinner-membrane translocator5e-1478.6
NC_008061:428501:442132442132443091960Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceinner-membrane translocator5e-1478.6
NC_014831:786011:792243792243793121879Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 1, HAAT family5e-1478.6
NC_010515:2358134:237333523733352374261927Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator6e-1478.2
NC_007511:719493:732428732428733387960Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit9e-1477.8
NC_011001:2517159:251921225192122520171960Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid ABC transporter permease1e-1377
NC_010552:2089140:209189420918942092820927Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceinner-membrane translocator1e-1377
NC_014614:2295131:231215123121512313029879Clostridium sticklandii, complete genomeleucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily4e-1375.5
NC_003454:2080705:209941620994162100342927Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBranched-chain amino acid transport system permease protein livH4e-1375.5
NC_005773:694990:699022699022699936915Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh-affinity branched-chain amino acid ABC transporter, permease protein BraD8e-1374.7
NC_004193:701622:719104719104719967864Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid ABC transporter permease1e-1273.9
NC_011768:79297:983709837099257888Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator1e-1273.9
NC_013524:392089:405992405992406882891Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeinner-membrane translocator2e-1273.6
NC_012108:3824977:383016438301643831096933Desulfobacterium autotrophicum HRM2, complete genomeABC-type branched-chain amino acid transport system, permease component4e-1272.4
NC_015422:3836911:383954038395403840469930Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter integral membrane subunit4e-1272
NC_016114:5539021:556218455621845563116933Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeinner-membrane translocator5e-1272
NC_007645:1245927:126485312648531265779927Hahella chejuensis KCTC 2396, complete genomeBranched-chain amino acid ABC-type transport system, permease components7e-1271.2
NC_009092:3057319:307552630755263076419894Shewanella loihica PV-4, complete genomeinner-membrane translocator3e-1169.7
NC_016582:9422650:944253094425309443462933Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative branched-chain amino acid ABC transporter permease3e-1169.3
NC_021066:1393750:141023314102331411147915Raoultella ornithinolytica B6, complete genomehigh-affinity branched-chain amino acid ABC transporter membrane protein4e-1168.9
NC_015275:566000:567909567909568808900Clostridium lentocellum DSM 5427 chromosome, complete genomeABC-type transporter, integral membrane subunit7e-1168.2
NC_015318:981989:997915997915998787873Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit6e-1168.2
NC_011742:3799788:380425438042543805180927Escherichia coli S88 chromosome, complete genomebranched-chain amino acid transporter permease subunit LivH8e-1167.8
NC_008563:3888232:388950638895063890432927Escherichia coli APEC O1, complete genomehigh-affinity branched-chain amino acid transport system permease protein LivH8e-1167.8
NC_007946:3855445:385671938567193857645927Escherichia coli UTI89, complete genomehigh-affinity branched-chain amino acid transport system permease protein livH8e-1167.8
NC_014844:2638994:265764826576482658550903Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeinner-membrane translocator2e-1067
NC_009436:2685910:268828626882862689200915Enterobacter sp. 638, complete genomeinner-membrane translocator1e-1067
NC_015224:279037:282706282706283632927Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched-chain amino acid transporter permease subunit LivH5e-1065.1
NC_019897:2908971:2913408291340829151981791Thermobacillus composti KWC4 chromosome, complete genomebranched-chain amino acid ABC transporter permease5e-1065.1
NC_010572:6463939:648820664882066489135930Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter permease protein6e-1065.1
NC_013510:3324978:333325433332543334216963Thermomonospora curvata DSM 43183, complete genomeinner-membrane translocator6e-1065.1
NC_015556:819503:832389832389833303915Pseudomonas fulva 12-X chromosome, complete genomeinner-membrane translocator7e-1064.7
NC_005296:4574213:457421345742134575151939Rhodopseudomonas palustris CGA009, complete genomepossible ABC transporter, permease protein1e-0964.3
NC_015953:1581542:159406815940681594997930Streptomyces sp. SirexAA-E chromosome, complete genomeinner-membrane translocator1e-0963.9
NC_008786:4216152:423528442352844236147864Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator4e-0962
NC_017059:469108:490260490260491210951Rhodospirillum photometricum DSM 122, complete genomeInner-membrane translocator5e-0962
NC_008786:5128363:513951351395135140397885Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator7e-0961.6
NC_011060:2099255:210740221074022108286885Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator2e-0860.1
NC_007963:1582089:160694516069451607814870Chromohalobacter salexigens DSM 3043, complete genomeinner-membrane translocator2e-0860.1
NC_007604:2555000:257574625757462576687942Synechococcus elongatus PCC 7942, complete genomeintegral membrane protein of the ABC-type Nat permease for neutral amino acids NatD4e-0858.9
NC_016633:1898234:189823418982341899109876Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC-type transport system, permease component5e-0755.5
NC_011757:1553500:155955015595501560434885Methylobacterium chloromethanicum CM4, complete genomeinner-membrane translocator5e-0755.1
NC_012988:1817000:182309118230911823975885Methylobacterium extorquens DM4, complete genomeABC transporter5e-0755.1
NC_017192:1063955:106518710651871066059873Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component2e-0653.5
NC_011060:1898224:193192919319291932798870Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator2e-0653.1
NC_014830:3438504:347840034784003479263864Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator3e-0652.8
NC_013522:698114:722229722229723113885Thermanaerovibrio acidaminovorans DSM 6589, complete genomeinner-membrane translocator4e-0652.4
NC_014153:1663597:167626816762681677137870Thiomonas intermedia K12 chromosome, complete genomeinner-membrane translocator6e-0652
NC_014828:2497462:251340325134032514260858Ethanoligenens harbinense YUAN-3 chromosome, complete genomeinner-membrane translocator6e-0651.6
NC_015318:1583839:159048715904871591350864Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit6e-0651.6
NC_013595:5221330:523591652359165236794879Streptosporangium roseum DSM 43021, complete genomeinner-membrane translocator7e-0651.6