Pre_GI: BLASTP Hits

Some Help

Query: NC_007948:360199:369335 Polaromonas sp. JS666, complete genome

Start: 369335, End: 369733, Length: 399

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:1246000:127379612737961274182387Methylobacterium chloromethanicum CM4, complete genomeEndoribonuclease L-PSP2e-1684.3
NC_010170:2374852:237607623760762376462387Bordetella petrii, complete genomeputative translational inhibitor5e-1683.2
NC_010172:1199725:120944312094431209829387Methylobacterium extorquens PA1, complete genomeEndoribonuclease L-PSP2e-1581.3
NC_014640:2693060:270855427085542708949396Achromobacter xylosoxidans A8 chromosome, complete genomeendoribonuclease L-PSP family protein9e-1579
NC_015277:5211779:523113752311375231598462Sphingobacterium sp. 21 chromosome, complete genomeEndoribonuclease L-PSP3e-1477.4
NC_010645:1341475:136079613607961361197402Bordetella avium 197N, complete genomeendoribonuclease9e-1475.5
NC_008313:886248:911312911312911713402Ralstonia eutropha H16 chromosome 1, complete sequenceputative translation initiation inhibitor, yjgF family6e-1372.8
NC_010623:1961685:201993020199302020382453Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP8e-1372.4
NC_003911:3864852:388910438891043889520417Silicibacter pomeroyi DSS-3, complete genomeendoribonuclease L-PSP family protein2e-1271.2
NC_016860:4024000:404045640404564040836381Salmonella enterica subsp. enterica serovar Typhimurium strtranslation initiation inhibitor7e-1269.3
NC_011297:1167615:117385711738571174234378Dictyoglomus thermophilum H-6-12, complete genomeendoribonuclease L-PSP6e-1269.3
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease1e-1168.2
NC_014532:3967463:398728439872843987673390Halomonas elongata DSM 2581, complete genomeK07567 TdcF protein1e-1065.5
NC_004088:3923804:393208239320823932462381Yersinia pestis KIM, complete genomehypothetical protein9e-1165.5
NC_010634:4001154:401088840108884011268381Yersinia pseudotuberculosis PB1/+, complete genomeendoribonuclease L-PSP9e-1165.5
NC_003143:675622:688077688077688457381Yersinia pestis CO92, complete genomeputative translational inhibitor protein9e-1165.5
NC_008150:3495851:350498335049833505363381Yersinia pestis Antiqua, complete genomeputative translational inhibitor protein9e-1165.5
NC_010159:1071937:107785110778511078231381Yersinia pestis Angola, complete genomeputative endoribonuclease L-PSP9e-1165.5
NC_006155:4062000:407068240706824071062381Yersinia pseudotuberculosis IP 32953, complete genomeputative translational inhibitor protein9e-1165.5
NC_010465:660207:668352668352668732381Yersinia pseudotuberculosis YPIII, complete genomeendoribonuclease L-PSP9e-1165.5
NC_005810:3272765:328090632809063281286381Yersinia pestis biovar Microtus str. 91001, complete genomeputative translational inhibitor protein9e-1165.5
NC_008149:587689:599607599607599987381Yersinia pestis Nepal516, complete genometranslational inhibitor protein9e-1165.5
NC_009381:460358:470044470044470424381Yersinia pestis Pestoides F chromosome, complete genometranslational inhibitor protein9e-1165.5
NC_014029:729675:741586741586741966381Yersinia pestis Z176003 chromosome, complete genomeputative translational inhibitor protein9e-1165.5
NC_017154:671816:683738683738684118381Yersinia pestis D106004 chromosome, complete genomeputative translational inhibitor protein9e-1165.5
NC_017160:676249:685923685923686303381Yersinia pestis D182038 chromosome, complete genomeputative translational inhibitor protein9e-1165.5
NC_017265:3790750:379744437974443797824381Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative translational inhibitor protein9e-1165.5
NC_011661:1332309:135425513542551354632378Dictyoglomus turgidum DSM 6724, complete genomeendoribonuclease L-PSP1e-1065.1
NC_009708:633054:641199641199641579381Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeendoribonuclease L-PSP2e-1064.7
NC_008314:477722:515235515235515708474Ralstonia eutropha H16 chromosome 2, complete sequenceEndoribonuclease L-PSP3e-1063.9
NC_009342:841500:851477851477851887411Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-1063.9
NC_018750:6869675:688702968870296887505477Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein3e-1063.9
NC_010645:558974:577112577112577549438Bordetella avium 197N, complete genome2-aminomuconate deaminase3e-1063.9
NC_008786:557314:561834561834562226393Verminephrobacter eiseniae EF01-2, complete genomeEndoribonuclease L-PSP4e-1063.5
NC_007951:3631772:363641636364163636853438Burkholderia xenovorans LB400 chromosome 1, complete sequence2-aminomuconate deaminase6e-1062.8
NC_013385:90331:993919939199813423Ammonifex degensii KC4, complete genomeendoribonuclease L-PSP9e-1062.4
NC_015144:1526669:153075515307551531147393Weeksella virosa DSM 16922 chromosome, complete genomeendoribonuclease L-PSP8e-1062.4
NC_007912:4661141:468365446836544684037384Saccharophagus degradans 2-40, complete genomePeptidase S1C, Do1e-0961.6
NC_008148:2290806:229243722924372292835399Rubrobacter xylanophilus DSM 9941, complete genomeEndoribonuclease L-PSP1e-0961.6
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP2e-0961.6
NC_015589:7678:182061820618589384Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeendoribonuclease L-PSP2e-0961.2
NC_007576:435713:457772457772458158387Lactobacillus sakei subsp. sakei 23K, complete genomePutative single-stranded mRNA endoribonuclease3e-0960.8
NC_017079:700524:701704701704702087384Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein2e-0960.8
NC_011283:1811000:187396318739631874388426Klebsiella pneumoniae 342 chromosome, complete genomeendoribonuclease L-PSP family protein4e-0960.1
NC_003296:1696958:170337917033791703756378Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein5e-0959.7
NC_003296:1665569:167318916731891673566378Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein5e-0959.7
NC_007348:2519447:254236525423652542763399Ralstonia eutropha JMP134 chromosome 2, complete sequenceEndoribonuclease L-PSP5e-0959.7
NC_013729:2157785:215961421596142160033420Kribbella flavida DSM 17836, complete genomeEndoribonuclease L-PSP5e-0959.7
NC_014364:2904443:290909329090932909467375Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeendoribonuclease L-PSP8e-0959.3
NC_017249:2109843:212676621267662127152387Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-0959.3
NC_003112:673772:689773689773690162390Neisseria meningitidis MC58, complete genomeputative ribonuclease1e-0858.9
NC_010120:609323:631641631641632030390Neisseria meningitidis 053442, complete genomeribonuclease, putative1e-0858.9
NC_008767:613394:634500634500634889390Neisseria meningitidis FAM18, complete genomehypothetical protein1e-0858.9
NC_013016:571255:589884589884590273390Neisseria meningitidis alpha14 chromosome, complete genometranslation initiation inhibitor1e-0858.9
NC_017501:1680075:168249516824951682884390Neisseria meningitidis 8013, complete genomeputative endoribonuclease1e-0858.9
NC_017505:670919:691717691717692106390Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein1e-0858.9
NC_017513:618500:642487642487642876390Neisseria meningitidis G2136 chromosome, complete genomeendoribonuclease L-PSP1e-0858.9
NC_017514:1568591:156925115692511569640390Neisseria meningitidis M01-240149 chromosome, complete genomeendoribonuclease L-PSP1e-0858.9
NC_017516:1613762:161442216144221614811390Neisseria meningitidis H44/76 chromosome, complete genomeendoribonuclease L-PSP1e-0858.9
NC_017518:743955:765382765382765771390Neisseria meningitidis NZ-05/33 chromosome, complete genomeendoribonuclease L-PSP1e-0858.9
NC_010623:1961685:197300619730061973410405Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP9e-0958.9
NC_015690:2553837:256098725609872561379393Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein9e-0958.9
NC_020156:3157899:317085731708573171375519Nonlabens dokdonensis DSW-6, complete genomeendoribonuclease L-PSP1e-0858.5
NC_020302:1074120:107518810751881075625438Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranslation initiation inhibitor1e-0858.5
NC_008148:1859888:188143618814361881861426Rubrobacter xylanophilus DSM 9941, complete genomeEndoribonuclease L-PSP1e-0858.2
NC_017515:1601954:160261416026141603003390Neisseria meningitidis M04-240196 chromosome, complete genomeendoribonuclease L-PSP2e-0858.2
NC_010512:110932:130333130333130731399Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceEndoribonuclease L-PSP2e-0858.2
NC_009614:3714770:372855137285513728928378Bacteroides vulgatus ATCC 8482 chromosome, complete genomeendoribonuclease L-PSP2e-0858.2
NC_014366:354000:370852370852371235384Gamma proteobacterium HdN1, complete genomePutative translation initiation inhibitor, yjgF family2e-0857.8
NC_002927:4392768:439466943946694395085417Bordetella bronchiseptica RB50, complete genomehypothetical protein5e-0856.6
NC_013061:2077603:207901820790182079443426Pedobacter heparinus DSM 2366, complete genomeEndoribonuclease L-PSP5e-0856.6
NC_015966:2337833:235673623567362357134399Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_013501:931418:931418931418931816399Rhodothermus marinus DSM 4252, complete genomeendoribonuclease L-PSP4e-0856.6
NC_015563:2656628:267986026798602680264405Delftia sp. Cs1-4 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_016935:3103430:311051431105143110906393Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein7e-0855.8
NC_009436:3807420:382036738203673820762396Enterobacter sp. 638, complete genomeendoribonuclease L-PSP8e-0855.8
NC_011740:2859933:288112928811292881563435Escherichia fergusonii ATCC 35469, complete genomeputative endoribonuclease9e-0855.5
NC_020829:4390417:440964644096464410062417Pseudomonas denitrificans ATCC 13867, complete genomeendoribonuclease L-PSP1e-0755.5
NC_011283:1811000:188610318861031886492390Klebsiella pneumoniae 342 chromosome, complete genomeendoribonuclease L-PSP family protein1e-0755.1
NC_003888:8569962:857391985739198574302384Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0755.1
NC_010623:1871492:188718318871831887587405Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP2e-0754.3
NC_016885:809000:814549814549814929381Pyrobaculum oguniense TE7 chromosome, complete genomeendoribonuclease L-PSP3e-0753.9
NC_015224:2061951:206342220634222063808387Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-0753.9
NC_016077:2044876:205277020527702053153384Acidaminococcus intestini RyC-MR95 chromosome, complete genomeendoribonuclease L-PSP3e-0753.9
AC_000091:4472000:447749444774944477889396Escherichia coli W3110 DNA, complete genomepredicted mRNA endoribonuclease3e-0753.9
NC_000913:4462782:447083744708374471232396Escherichia coli K12, complete genomepredicted mRNA endoribonuclease3e-0753.9
NC_010473:4564590:457264545726454573040396Escherichia coli str. K-12 substr. DH10B, complete genomepredicted mRNA endoribonuclease3e-0753.9
NC_014632:11925:310333103331416384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP4e-0753.5
NC_008817:539349:556560556560556952393Prochlorococcus marinus str. MIT 9515, complete genomePutative translation initiation inhibitor, yjgF family6e-0753.1
NC_017517:703811:719695719695720084390Neisseria meningitidis M01-240355 chromosome, complete genomeendoribonuclease L-PSP5e-0753.1
NC_016609:7608723:763228376322837632669387Niastella koreensis GR20-10 chromosome, complete genomeendoribonuclease L-PSP5e-0753.1
NC_015496:2155816:216533021653302165776447Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeEndoribonuclease L-PSP5e-0753.1
NC_008800:2127918:212791821279182128307390Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein5e-0753.1
NC_010512:1196616:121117012111701211607438Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceEndoribonuclease L-PSP5e-0753.1
NC_010557:1030319:103315510331551033592438Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceEndoribonuclease L-PSP5e-0753.1
NC_006351:2759708:279335527933552793765411Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein7e-0752.8
NC_007963:2644930:267840626784062678843438Chromohalobacter salexigens DSM 3043, complete genomeEndoribonuclease L-PSP1e-0652.4
NC_013744:159861:178667178667179047381Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeendoribonuclease L-PSP9e-0752.4
NC_003210:870587:882328882328882705378Listeria monocytogenes EGD-e, complete genomehypothetical protein7e-0752.4
NC_013766:906550:918309918309918686378Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein7e-0752.4
NC_015666:1293500:129843212984321298812381Halopiger xanaduensis SH-6 chromosome, complete genomeendoribonuclease L-PSP1e-0652
NC_010658:4494103:450647745064774506872396Shigella boydii CDC 3083-94, complete genomeendoribonuclease L-PSP family protein1e-0652
NC_011742:4795733:480224848022484802643396Escherichia coli S88 chromosome, complete genomemRNA endoribonuclease1e-0652
NC_012947:3947238:395762239576223958017396Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP1e-0652
NC_012967:4449576:445609144560914456486396Escherichia coli B str. REL606 chromosome, complete genomeputative mRNA endoribonuclease1e-0652
NC_007613:4217557:424919142491914249586396Shigella boydii Sb227, complete genomehypothetical protein1e-0652
NC_019974:3013338:302391930239193024308390Natronococcus occultus SP4, complete genomeendoribonuclease L-PSP, putative1e-0651.6
NC_013132:7204082:7226261722626172280031743Chitinophaga pinensis DSM 2588, complete genomeEndoribonuclease L-PSP1e-0651.6
NC_010498:4821519:482803448280344828429396Escherichia coli SMS-3-5, complete genomeendoribonuclease L-PSP family protein1e-0651.6
NC_018581:759932:766157766157766543387Gordonia sp. KTR9 chromosome, complete genomePutative translation initiation inhibitor, yjgF family1e-0651.6
NC_005072:508827:526041526041526433393Prochlorococcus marinus subsp. pastoris str. CCMP1986, completehypothetical protein2e-0651.2
NC_008701:391216:401455401455401829375Pyrobaculum islandicum DSM 4184, complete genomeputative endoribonuclease L-PSP2e-0650.8
NC_008687:229941:230709230709231107399Paracoccus denitrificans PD1222 chromosome 2, complete sequenceEndoribonuclease L-PSP2e-0650.8
NC_014632:113420:126595126595126978384Ilyobacter polytropus DSM 2926 chromosome, complete genomeendoribonuclease L-PSP2e-0650.8
NC_009668:1591290:159437815943781594770393Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceendoribonuclease L-PSP3e-0650.8
NC_008319:1727686:173335017333501733754405Synechococcus sp. CC9311, complete genomeputative endoribonuclease L-PSP3e-0650.4
NC_016025:807226:829399829399829797399Candidatus Chloracidobacterium thermophilum B chromosome chromosomeendoribonuclease L-PSP3e-0650.4
NC_007974:138176:150604150604151227624Ralstonia metallidurans CH34 chromosome 2, complete sequenceEndoribonuclease L-PSP6e-0649.7
NC_014328:4387303:438918143891814389555375Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative endoribonuclease L-PSP6e-0649.7
NC_013922:2110894:211089421108942111277384Natrialba magadii ATCC 43099 chromosome, complete genomeEndoribonuclease L-PSP8e-0649.3
NC_003296:1665569:166827616682761668713438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein8e-0648.9
NC_003296:1696958:169846616984661698903438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN8e-0648.9