Pre_GI: BLASTP Hits

Some Help

Query: NC_007925:138927:162727 Rhodopseudomonas palustris BisB18, complete genome

Start: 162727, End: 162987, Length: 261

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007958:4371125:439296643929664393235270Rhodopseudomonas palustris BisB5, complete genomeConjugal transfer TraD6e-31132
NC_008435:1131242:115975811597581160027270Rhodopseudomonas palustris BisA53, complete genomeConjugal transfer TraD family protein1e-30131
NC_009720:2945655:294908529490852949351267Xanthobacter autotrophicus Py2, complete genomeconjugal transfer TraD family protein5e-28122
NC_009720:251703:272961272961273227267Xanthobacter autotrophicus Py2, complete genomeconjugal transfer TraD family protein5e-28122
NC_007925:1085500:109068610906861090955270Rhodopseudomonas palustris BisB18, complete genomeConjugal transfer TraD9e-28122
NC_009445:1316000:131982613198261320062237Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer protein traD6e-27119
NC_014217:2020737:202419520241952024422228Starkeya novella DSM 506 chromosome, complete genomeConjugal transfer TraD family protein7e-27119
NC_002678:763808:789197789197789415219Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traD8e-25112
NC_015675:4565500:457573145757314575961231Mesorhizobium opportunistum WSM2075 chromosome, complete genomeConjugal transfer TraD family protein4e-24110
NC_009720:464078:481555481555481791237Xanthobacter autotrophicus Py2, complete genomeconjugal transfer TraD family protein9e-23105
NC_007802:3252300:327771032777103277955246Jannaschia sp. CCS1, complete genomeConjugal transfer TraD1e-22105
NC_009445:6424000:644285164428516443114264Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer protein, TraD3e-22103
NC_014217:2760898:276626127662612766530270Starkeya novella DSM 506 chromosome, complete genomeConjugal transfer TraD family protein6e-22102
NC_010338:359940:375567375567375875309Caulobacter sp. K31, complete genomeConjugal transfer TraD family protein4e-1373.2
NC_010338:1216385:121722812172281217458231Caulobacter sp. K31, complete genomeConjugal transfer TraD family protein2e-1271.2