Pre_GI: BLASTP Hits

Some Help

Query: NC_007606:1209132:1221453 Shigella dysenteriae Sd197, complete genome

Start: 1221453, End: 1221992, Length: 540

Host Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:1997891:200106120010612001600540Escherichia coli O111:H- str. 11128, complete genomeputative inner membrane protein1e-76285
NC_009801:1392696:141555014155501416089540Escherichia coli E24377A, complete genomeintracellular septation protein A1e-76285
NC_010473:1384000:139977113997711400310540Escherichia coli str. K-12 substr. DH10B, complete genomepredicted inner membrane protein1e-76285
NC_020063:2531643:253987525398752540411537Enterobacteriaceae bacterium strain FGI 57, complete genomeintracellular septation protein A6e-72269
NC_010465:2282874:228484422848442285386543Yersinia pseudotuberculosis YPIII, complete genomeintracellular septation protein A3e-63240
NC_008150:1705152:174406317440631744605543Yersinia pestis Antiqua, complete genomeputative intracellular septation protein3e-63240
NC_010159:2440947:244094724409472441489543Yersinia pestis Angola, complete genomeintracellular septation protein A3e-63240
NC_009381:1064227:106422710642271064769543Yersinia pestis Pestoides F chromosome, complete genomeintracellular septation protein A3e-63240
NC_009708:2245586:224755622475562248098543Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeintracellular septation protein A3e-63240
NC_014029:2138000:214086121408612141403543Yersinia pestis Z176003 chromosome, complete genomeputative intracellular septation protein3e-63240
NC_012779:1629731:164159016415901642132543Edwardsiella ictaluri 93-146, complete genomeintracellular septation protein A, putative3e-57221
NC_007712:2287053:229149322914932292023531Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein7e-55213
NC_007645:2181739:218173921817392182323585Hahella chejuensis KCTC 2396, complete genomeintracellular septation protein A4e-31134
NC_014722:1497244:151457315145731515232660Burkholderia rhizoxinica HKI 454, complete genomeintracellular septation protein6e-29126
NC_008344:2434344:243434424343442434889546Nitrosomonas eutropha C91, complete genomeintracellular septation protein A2e-25114
NC_013960:2366910:238659523865952387209615Nitrosococcus halophilus Nc4 chromosome, complete genomeIntracellular septation protein A4e-24110
NC_008271:248371:266758266758267321564Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencepossible intracellular septation protein1e-1168.9
NC_018643:1309804:131014413101441310695552Alpha proteobacterium HIMB5 chromosome, complete genomeintracellular septation protein A3e-1167.8