Pre_GI: BLASTP Hits

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Query: NC_007604:2555000:2558588 Synechococcus elongatus PCC 7942, complete genome

Start: 2558588, End: 2559484, Length: 897

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:1743500:175730017573001758196897Synechococcus elongatus PCC 6301, complete genomehypothetical protein8e-150529
NC_018866:1966373:197351119735111974434924Dehalobacter sp. DCA chromosome, complete genomeCell division inhibitor3e-60231
NC_018867:1996154:200329220032922004215924Dehalobacter sp. CF chromosome, complete genomeCell division inhibitor3e-60231
NC_012779:2586175:260451326045132605409897Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-52206
NC_014394:1815638:183063418306341831533900Gallionella capsiferriformans ES-2 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-50199
NC_014029:3245778:326794732679473268855909Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-50197
NC_017154:3188795:321099832109983211906909Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-50197
NC_017168:2626996:264920026492002650108909Yersinia pestis A1122 chromosome, complete genomenucleoside-diphosphate sugar epimerase7e-50197
NC_008800:1459015:147434014743401475248909Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-49196
NC_015224:3225000:323127532312753232183909Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein4e-49195
NC_002977:2407392:243432624343262435255930Methylococcus capsulatus str. Bath, complete genomeconserved hypothetical protein TIGR017773e-47189
NC_015634:652000:672172672172673077906Bacillus coagulans 2-6 chromosome, complete genomeNAD dependent epimerase family protein5e-47188
NC_013730:7355010:737007173700717370982912Spirosoma linguale DSM 74, complete genomedomain of unknown function DUF17319e-47187
NC_017353:2129738:214474721447472145646900Staphylococcus lugdunensis N920143, complete genomehypothetical protein6e-46184
NC_010995:1648897:166286916628691663798930Cellvibrio japonicus Ueda107, complete genomeconserved hypothetical protein TIGR017774e-45181
NC_017167:2647655:265019726501972651063867Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein1e-40167
NC_007350:1971762:198728119872811988177897Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,putative nucleoside-diphosphate sugar epimerase1e-39164
NC_009487:866000:870452870452871354903Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein1e-38160
NC_008309:1155218:116294611629461163833888Haemophilus somnus 129PT, complete genomehypothetical protein9e-37154
NC_015177:2972701:297375629737562974670915Pedobacter saltans DSM 12145 chromosome, complete genomedomain of unknown function DUF17314e-36151
NC_016941:807155:812378812378813247870Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein1e-35150
NC_013521:1713416:172919317291931730140948Sanguibacter keddieii DSM 10542, complete genomeconserved hypothetical protein TIGR017777e-35147
NC_015711:237526:2411122411122425331422Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-34146
NC_010612:3969244:397302839730283973939912Mycobacterium marinum M, complete genomehypothetical protein8e-34144
NC_020133:3787844:378961537896153790526912Mycobacterium liflandii 128FXT, complete genomeputative nucleoside-diphosphate sugar epimerase8e-34144
NC_010519:1764261:176771117677111768598888Haemophilus somnus 2336 chromosome, complete genomehypothetical protein2e-33142
NC_016783:1313008:1348589134858913499501362Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein1e-32140
NC_016788:1315877:1323700132370013250611362Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein1e-32140
NC_016802:1317365:1325189132518913265501362Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein1e-32140
NC_016785:1297208:1305874130587413072351362Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein1e-32140
NC_016789:1334514:1370098137009813714591362Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein1e-32140
NC_016799:1343020:1379743137974313811041362Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein1e-32140
NC_016800:1344189:1352855135285513542161362Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein1e-32140
NC_016801:1361597:1369418136941813707791362Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein1e-32140
NC_002578:1305781:132408013240801324940861Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein3e-32139
NC_002935:1315019:1350598135059813519591362Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein6e-32138
NC_016782:1316467:1324291132429113256521362Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein6e-32138
NC_016786:1316436:1324261132426113256221362Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein6e-32138
NC_016787:1276983:1313709131370913150701362Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein6e-32138
NC_016790:1259356:1291091129109112924521362Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein6e-32138
NC_006361:1827991:184080018408001841702903Nocardia farcinica IFM 10152, complete genomeputative epimerase9e-31134
NC_016001:2421580:242158024215802422485906Flavobacterium branchiophilum, complete genomeputative nucleoside-diphosphate sugar epimerase1e-26120
NC_013729:2813895:282843828284382829340903Kribbella flavida DSM 17836, complete genomedomain of unknown function DUF17317e-24111
NC_014158:1566310:158536915853691586283915Tsukamurella paurometabola DSM 20162 chromosome, complete genomedomain of unknown function DUF17313e-1892.4
NC_014931:5088125:510010351001035101062960Variovorax paradoxus EPS chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-1066.6
NC_015576:3976679:4027668402766840302682601Mycobacterium sp. JDM601 chromosome, complete genomehypothetical protein2e-0859.7
NC_011146:4070000:407447340744734075360888Geobacter bemidjiensis Bem, complete genomeNAD-dependent epimerase/dehydratase4e-0858.9
NC_008781:3688965:369548636954863696433948Polaromonas naphthalenivorans CJ2, complete genomeNAD-dependent epimerase/dehydratase4e-0755.8
NC_002505:238569:267392267392268363972Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeUDP-glucose 4-epimerase8e-0754.7
NC_009457:2764972:279252627925262793497972Vibrio cholerae O395 chromosome 2, complete sequenceUDP-glucose 4-epimerase8e-0754.7
NC_012578:224559:252119252119253090972Vibrio cholerae M66-2 chromosome I, complete sequenceUDP-glucose 4-epimerase8e-0754.7
NC_012582:272320:299874299874300845972Vibrio cholerae O395 chromosome chromosome I, complete sequenceUDP-glucose 4-epimerase8e-0754.7
NC_012668:368305:371877371877372848972Vibrio cholerae MJ-1236 chromosome 1, complete sequenceUDP-glucose 4-epimerase8e-0754.7
NC_016445:2663837:269139926913992692370972Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeUDP-glucose 4-epimerase8e-0754.7
NC_016944:238580:267403267403268374972Vibrio cholerae IEC224 chromosome I, complete sequenceUDP-glucose 4-epimerase8e-0754.7
NC_013889:1623697:164265816426581643617960Thioalkalivibrio sp. K90mix chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-0652.4
NC_010505:4820000:4828936482893648315662631Methylobacterium radiotolerans JCM 2831, complete genomeNAD-dependent epimerase/dehydratase5e-0652
NC_013959:2892660:289932028993202900273954Sideroxydans lithotrophicus ES-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-0651.6
NC_011283:3177350:318059131805913181496906Klebsiella pneumoniae 342 chromosome, complete genome3-beta hydroxysteroid dehydrogenase/isomerase family protein8e-0651.2