Pre_GI: BLASTP Hits

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Query: NC_007604:1512709:1512709 Synechococcus elongatus PCC 7942, complete genome

Start: 1512709, End: 1513965, Length: 1257

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002927:1787633:1809129180912918106401512Bordetella bronchiseptica RB50, complete genomehypothetical protein3e-74279
NC_008319:1376938:1385788138578813871251338Synechococcus sp. CC9311, complete genomethiol oxidoreductase2e-72273
NC_016642:471656:4875684875684891061539Pseudovibrio sp. FO-BEG1 chromosome, complete genomethiol oxidoreductase9e-72271
NC_015856:4342500:4342762434276243460223261Collimonas fungivorans Ter331 chromosome, complete genomeputative thiol oxidoreductase9e-52204
NC_008536:3160540:3168791316879131701221332Solibacter usitatus Ellin6076, complete genomethiol oxidoreductase-like protein4e-23109
NC_008536:3988520:4000965400096540024941530Solibacter usitatus Ellin6076, complete genomethiol oxidoreductase-like protein8e-1788.6