Pre_GI: BLASTP Hits

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Query: NC_007604:1383192:1397087 Synechococcus elongatus PCC 7942, complete genome

Start: 1397087, End: 1397878, Length: 792

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:217697:222922222922223713792Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-135481
NC_009482:2051890:207838520783852079230846Synechococcus sp. RCC307 chromosome, complete genomehypothetical protein1e-68259
NC_009481:2204629:223241422324142233316903Synechococcus sp. WH 7803 chromosome, complete genomehypothetical protein2e-68259
NC_008312:723456:724335724335725195861Trichodesmium erythraeum IMS101, complete genomezinc finger, SWIM-type1e-60233
NC_014815:3790050:3814507381450738155531047Micromonospora sp. L5 chromosome, complete genomezinc finger swim domain-containing protein2e-29129
NC_020126:10117469:101165101011651010117472963Myxococcus stipitatus DSM 14675, complete genomeSWIM zinc finger domain-containing protein1e-28127
NC_019673:1275627:127479712747971275630834Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-27123
NC_010981:314745:3380193380193415553537Wolbachia pipientis, complete genomehelicase, SNF2 family3e-1892.4
NC_014210:3170537:317810831781083178916809Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-1582.8
NC_013093:1157476:116151911615191162505987Actinosynnema mirum DSM 43827, complete genomezinc finger SWIM domain protein9e-1580.9
NC_014366:2826575:284538928453892846234846Gamma proteobacterium HdN1, complete genomehypothetical protein1e-1170.5
NC_016932:832748:856722856722857507786Corynebacterium pseudotuberculosis 316 chromosome, complete genomehypothetical protein1e-0860.8
NC_017317:944218:947315947315948100786Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-0860.8
NC_015683:947048:950145950145950930786Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein1e-0860.8
NC_016781:844613:868598868598869383786Corynebacterium pseudotuberculosis 3/99-5 chromosome, completehypothetical protein2e-0860.1
NC_017031:863093:868451868451869236786Corynebacterium pseudotuberculosis P54B96 chromosome, completehypothetical protein2e-0860.1
NC_017300:863898:868503868503869288786Corynebacterium pseudotuberculosis 1002 chromosome, completehypothetical protein2e-0860.1
NC_017301:863500:868225868225869010786Corynebacterium pseudotuberculosis C231 chromosome, completehypothetical protein2e-0860.1
NC_017303:863060:868418868418869203786Corynebacterium pseudotuberculosis I19 chromosome, complete genomehypothetical protein2e-0860.1
NC_017305:863072:868430868430869215786Corynebacterium pseudotuberculosis PAT10 chromosome, completehypothetical protein2e-0860.1
NC_014329:844622:868607868607869392786Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-0860.1