Pre_GI: BLASTP Hits

Some Help

Query: NC_007604:1183497:1195317 Synechococcus elongatus PCC 7942, complete genome

Start: 1195317, End: 1196492, Length: 1176

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:414696:4243134243134254881176Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-160565
NC_013440:1698047:1701854170185417030771224Haliangium ochraceum DSM 14365, complete genomemajor facilitator superfamily MFS_14e-2099.4
NC_011899:1437981:1441448144144814427251278Halothermothrix orenii H 168, complete genomemajor facilitator superfamily MFS_12e-1584
NC_009706:238160:2399242399242410841161Clostridium kluyveri DSM 555 chromosome, complete genometransporter protein8e-1272
NC_015500:1204501:1216765121676512179251161Treponema brennaborense DSM 12168 chromosome, complete genomemajor facilitator superfamily MFS_18e-1272
NC_011837:238160:2399242399242411261203Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1171.2
NC_010003:449192:4547234547234559071185Petrotoga mobilis SJ95, complete genomemajor facilitator superfamily MFS_11e-0758.2
NC_010003:1242846:1258581125858112597201140Petrotoga mobilis SJ95, complete genomemajor facilitator superfamily MFS_11e-0757.8
NC_010003:449192:4722814722814734651185Petrotoga mobilis SJ95, complete genomemajor facilitator superfamily MFS_12e-0757.8