Pre_GI: BLASTP Hits

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Query: NC_007492:5214709:5234505 Pseudomonas fluorescens PfO-1, complete genome

Start: 5234505, End: 5234759, Length: 255

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:3591758:360736236073623607616255Xenorhabdus nematophila ATCC 19061, complete genomeToxin yoeB9e-27118
NC_016513:1958500:198615919861591986413255Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetoxin4e-26116
NC_013416:1621469:164821916482191648473255Aggregatibacter actinomycetemcomitans D11S-1, complete genometoxin5e-26116
NC_013364:2645438:266750626675062667760255Escherichia coli O111:H- str. 11128, complete genometoxin of the YoeB-YefM toxin-antitoxin system9e-26115
NC_020125:1802000:181656318165631816820258Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein8e-26115
NC_014738:2011554:202108420210842021341258Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,addiction module toxin, txe/yoeb family8e-26115
NC_017045:1:263282632826585258Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,addiction module toxin, txe/yoeb family8e-26115
NC_004603:1897532:192297519229751923247273Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein4e-25113
NC_005139:1784000:183406918340691834341273Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein4e-25113
NC_008789:835909:875921875921876175255Halorhodospira halophila SL1, complete genomeaddiction module toxin, Txe/YoeB family8e-25112
NC_014355:2321957:232471523247152324969255Candidatus Nitrospira defluvii, complete genomeaddiction module toxin YoeB3e-24110
NC_010529:23775:459894598946258270Cupriavidus taiwanensis plasmid pRALTA, complete sequencetoxin of the YoeB-YefM toxin-antitoxin system4e-24110
NC_011146:2200142:222833422283342228588255Geobacter bemidjiensis Bem, complete genomeaddiction module toxin, Txe/YoeB family8e-24108
NC_016109:4088259:409814640981464098412267Kitasatospora setae KM-6054, complete genomeputative toxin9e-23105
NC_016941:2395502:241558024155802415846267Staphylococcus aureus subsp. aureus MSHR1132, complete genomeAddiction module toxin Txe/YoeB family protein1e-22105
NC_006513:881120:910490910490910822333Azoarcus sp. EbN1, complete genomehypothetical protein1e-22105
NC_009641:2513300:253501325350132535279267Staphylococcus aureus subsp. aureus str. Newman chromosome,addiction module toxin Txe/YoeB family protein2e-22104
NC_007795:2455468:247718124771812477447267Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein2e-22104
NC_002951:2448000:246651624665162466782267Staphylococcus aureus subsp. aureus COL, complete genomeaddiction module toxin, Txe/YoeB family2e-22104
NC_002952:2550500:257116625711662571432267Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein4e-22103
NC_008609:2643000:264663226466322646892261Pelobacter propionicus DSM 2379, complete genomeaddiction module toxin, Txe/YoeB family6e-22102
NC_017338:2456000:247503424750342475300267Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeaddiction module toxin Txe/YoeB family protein7e-22102
NC_007622:2399347:241881824188182419084267Staphylococcus aureus RF122, complete genomehypothetical protein7e-22102
NC_002758:2515310:253702025370202537286267Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein7e-22102
NC_012918:2668031:267400626740062674260255Geobacter sp. M21 chromosome, complete genomeTxe/YoeB family addiction module toxin2e-21101
NC_014218:534986:548946548946549215270Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeaddiction module toxin, Txe/YoeB family7e-2199
NC_014935:1047411:106054310605431060806264Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeaddiction module toxin, txe/yoeb family1e-2098.6
NC_013194:3861409:386829938682993868553255Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeaddiction module toxin, Txe/YoeB family1e-2098.6
NC_007777:3000941:301816530181653018425261Frankia sp. CcI3, complete genomeAddiction module toxin, Txe/YoeB1e-1995.1
NC_015703:4655488:466917546691754669432258Runella slithyformis DSM 19594 chromosome, complete genomeTxe/YoeB family addiction module toxin2e-1994
NC_018604:1292889:129953012995301299793264Brachyspira pilosicoli WesB complete genomeplasmid encoded toxin3e-1890.5
NC_013192:63111:854858548585748264Leptotrichia buccalis DSM 1135, complete genomeaddiction module toxin, Txe/YoeB family1e-1788.6
NC_007275:1:133761337613678303Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeaddiction module toxin Txe1e-1788.2
NC_015125:3284095:329888032988803299146267Microbacterium testaceum StLB037, complete genomehypothetical protein8e-1785.9
NC_012803:1753138:175604417560441756298255Micrococcus luteus NCTC 2665, complete genometoxin-antitoxin system, toxin component, Txe/YoeB family1e-1685.5
NC_015164:2078500:208464520846452084920276Bacteroides salanitronis DSM 18170 chromosome, complete genomeaddiction module toxin, Txe/YoeB family9e-1682
NC_013173:2884887:289322428932242893493270Desulfomicrobium baculatum DSM 4028, complete genomeaddiction module toxin, Txe/YoeB family1e-1582
NC_008789:472500:474873474873475133261Halorhodospira halophila SL1, complete genomeaddiction module toxin, Txe/YoeB family2e-1581.3
NC_009632:2545419:256707925670792567270192Staphylococcus aureus subsp. aureus JH1 chromosome, completeaddiction module antitoxin9e-1475.5
NC_017343:2367177:238888723888872389078192Staphylococcus aureus subsp. aureus ECT-R 2, complete genomehypothetical protein9e-1475.5
NC_017347:2511783:253106425310642531255192Staphylococcus aureus subsp. aureus T0131 chromosome, completeAddiction module antitoxin9e-1475.5
NC_017351:2489460:250933725093372509528192Staphylococcus aureus subsp. aureus 11819-97 chromosome, completehypothetical protein9e-1475.5
NC_009930:152500:167551167551167844294Acaryochloris marina MBIC11017 plasmid pREB5, complete sequenceaddiction module toxin, Txe/YoeB family protein1e-1375.1
NC_016928:2411486:243092924309292431120192Staphylococcus aureus subsp. aureus M013 chromosome, completehypothetical protein3e-1373.9
NC_013173:2884887:289587728958772896122246Desulfomicrobium baculatum DSM 4028, complete genomeaddiction module toxin, Txe/YoeB family4e-1373.2
NC_017068:2827568:285087428508742851149276Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative addiction module toxin3e-1270.1
NC_019940:2432689:244316824431682443443276Thioflavicoccus mobilis 8321 chromosome, complete genometoxin-antitoxin system, toxin component, Txe/YoeB family3e-1167
NC_015723:1347946:135113913511391351339201Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein2e-0961.6
NC_013960:1258000:126741312674131267682270Nitrosococcus halophilus Nc4 chromosome, complete genomeaddiction module toxin, Txe/YoeB family1e-0858.5
NC_015499:1790186:179421417942141794438225Thermodesulfobium narugense DSM 14796 chromosome, complete genome2e-0754.3