Pre_GI: BLASTP Hits

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Query: NC_007492:4310828:4333031 Pseudomonas fluorescens PfO-1, complete genome

Start: 4333031, End: 4333762, Length: 732

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016147:1435000:145243014524301453185756Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein3e-28125
NC_014394:1373602:1400546140054614041933648Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein2e-1273.2
NC_016026:468311:4683114683114709682658Micavibrio aeruginosavorus ARL-13 chromosome, complete genomepolysaccharide biosynthesis/export family protein2e-1272.8
NC_008750:1659095:167791316779131678698786Shewanella sp. W3-18-1, complete genomeprotein of unknown function DUF10172e-1169.3
NC_008228:3841897:384480538448053845548744Pseudoalteromonas atlantica T6c, complete genomeprotein of unknown function DUF10174e-1168.6
NC_005085:786851:7947327947327966241893Chromobacterium violaceum ATCC 12472, complete genomecapsule polysaccharide export system periplasmic protein8e-1167.4
NC_008321:1523323:155510315551031555888786Shewanella sp. MR-4, complete genomeprotein of unknown function DUF10176e-1064.7
NC_008322:1595500:162651316265131627298786Shewanella sp. MR-7, complete genomeprotein of unknown function DUF10171e-0963.9
NC_017075:4421486:4425734442573444276201887Rubrivivax gelatinosus IL144, complete genomecapsule polysaccharide export system periplasmic protein KpsD2e-0962.8
NC_011663:1709003:174630617463061747091786Shewanella baltica OS223 chromosome, complete genomehypothetical protein5e-0858.2
NC_008700:2701500:2727592272759227300752484Shewanella amazonensis SB2B, complete genomeClpX, ATPase regulatory subunit9e-0857.4
NC_012791:2052923:2077486207748620804582973Variovorax paradoxus S110 chromosome 1, complete genomeprotein of unknown function DUF940 membrane lipoprotein putative9e-0857.4
NC_014931:5088125:5088886508888650919303045Variovorax paradoxus EPS chromosome, complete genomeprotein of unknown function DUF940 membrane lipoprotein2e-0756.2
NC_015061:3840463:390220539022053902948744Rahnella sp. Y9602 chromosome, complete genomehypothetical protein2e-0756.2
NC_017047:3936624:396388039638803964623744Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein3e-0755.5
NC_002939:2008304:2008304200830420106492346Geobacter sulfurreducens PCA, complete genomepolysaccharide biosynthesis/export domain protein6e-0754.7
NC_015633:461143:461143461143462012870Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein2e-0653.1
NC_009052:3381943:3404476340447634072142739Shewanella baltica OS155, complete genomepolysaccharide export protein2e-0652.8
NC_015497:1287877:133042013304201331217798Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein2e-0652.8
NC_009654:866124:8720588720588746672610Marinomonas sp. MWYL1, complete genomepolysaccharide export protein4e-0651.6
NC_013421:3279499:327949932794993280281783Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF10175e-0651.6
NC_008570:3220539:322930532293053230063759Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative periplasmic protein8e-0650.8