Pre_GI: BLASTP Hits

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Query: NC_007492:4310828:4313858 Pseudomonas fluorescens PfO-1, complete genome

Start: 4313858, End: 4314721, Length: 864

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:1179382:119669911966991197625927Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein D1e-22107
NC_009659:892272:897993897993898925933Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein D1e-20100
NC_010682:1913941:192672619267261927655930Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance D domain protein6e-1788.2
CU928145:3958572:397112539711253972054930Escherichia coli 55989 chromosome, complete genomeCopper resistance protein D4e-1685.5
NC_011748:3958572:397112539711253972054930Escherichia coli 55989, complete genomeCopper resistance protein D4e-1685.5
NC_010170:4800000:484363648436364844553918Bordetella petrii, complete genomeputative copper resistance protein D1e-1584
NC_009778:4188000:421811342181134219042930Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-1581.6
NC_009138:1518315:153784815378481538768921Herminiimonas arsenicoxydans, complete genomeCopper resistance protein D2e-1273.2
NC_009659:1923925:195516619551661956086921Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance protein D3e-1065.9
NC_015376:662844:674744674744675265522Burkholderia gladioli BSR3 chromosome chromosome 2, completecopper resistance protein D8e-0961.2