Pre_GI: BLASTP Hits

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Query: NC_007492:3954345:3986544 Pseudomonas fluorescens PfO-1, complete genome

Start: 3986544, End: 3986747, Length: 204

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3253575:327239132723913272810420Pseudomonas syringae pv. phaseolicola 1448A, complete genomepeptidyl-prolyl cis-trans isomerase, FKBP-type8e-24108
NC_007005:2686551:271676227167622717136375Pseudomonas syringae pv. syringae B728a, complete genomePeptidylprolyl isomerase, FKBP-type2e-23107
NC_017387:1110412:113072511307251131066342Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeFKBP-type peptidyl-prolyl cis-trans isomerase 12e-21101
NC_010546:3071377:307216430721643072730567Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceFKBP-type peptidyl-prolyl cis-trans isomerase2e-1270.9
NC_017513:9081:260582605826387330Neisseria meningitidis G2136 chromosome, complete genomeFKBP-type peptidyl-prolyl cis-trans isomerase3e-1270.5
NC_003888:1751179:175227017522701752641372Streptomyces coelicolor A3(2), complete genomepeptidyl-prolyl cis-trans isomerase3e-0960.5
NC_015656:4850833:485825448582544858583330Frankia symbiont of Datisca glomerata chromosome, complete genomepeptidylprolyl isomerase6e-0959.3
NC_014738:55782:6292562925640071083Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,peptidyl-prolyl isomerase1e-0858.5
NC_003155:7979050:799959979995997999973375Streptomyces avermitilis MA-4680, complete genomeFK-506 binding protein, peptidyl-prolyl cis-trans isomerase3e-0857
NC_008255:4208913:420891342089134209806894Cytophaga hutchinsonii ATCC 33406, complete genomeFKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)5e-0856.6
NC_010688:2781624:278279127827912783276486Xanthomonas campestris pv. campestris, complete genomepeptidylprolyl isomerase9e-0855.5
NC_014924:1701952:172120217212021721642441Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomePeptidylprolyl isomerase1e-0755.1
NC_014212:319815:335933335933336430498Meiothermus silvanus DSM 9946 chromosome, complete genomePeptidylprolyl isomerase2e-0754.3
NC_007498:357484:367411367411368106696Pelobacter carbinolicus DSM 2380, complete genomeFKBP-type peptidyl-prolyl cis-trans isomerase6e-0753.1
NC_013714:2203854:220621622062162207028813Bifidobacterium dentium Bd1, complete genomepossible secreted peptidyl-prolyl cis-trans isomerase protein2e-0651.2
NC_020156:49666:548825488255814933Nonlabens dokdonensis DSW-6, complete genomepeptidyl-prolyl cis-trans isomerase9e-0648.9