Pre_GI: BLASTP Hits

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Query: NC_007492:2203220:2223145 Pseudomonas fluorescens PfO-1, complete genome

Start: 2223145, End: 2224173, Length: 1029

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:7133149:7154016715401671550321017Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA 3'-terminal phosphate cyclase7e-58224
NC_003551:1678882:74874818061059Methanopyrus kandleri AV19, complete genomeRNA 3'-terminal-phosphate cyclase3e-38159
NC_014122:247660:2499372499372509531017Methanocaldococcus infernus ME chromosome, complete genomeRNA 3'-phosphate cyclase9e-37154
NC_015931:134601:1795531795531806231071Pyrolobus fumarii 1A, complete genomeRNA 3'-phosphate cyclase4e-36152
NC_016885:2294000:2297380229738022984261047Pyrobaculum oguniense TE7 chromosome, complete genomeRNA 3''-phosphate cyclase3e-35149
NC_019977:2375703:238190323819032382898996Methanomethylovorans hollandica DSM 15978, complete genomeRNA 3''-phosphate cyclase4e-34145
NC_015636:1603664:1623588162358816246311044Methanothermococcus okinawensis IH1 chromosome, complete genomeRNA 3'-phosphate cyclase1e-32140
NC_008553:1858558:2618261836311014Methanosaeta thermophila PT, complete genomeRNA-3'-phosphate cyclase6e-32138
NC_016070:1448488:1448488144848814495731086Thermoproteus tenax Kra 1, complete genomeRNA-3'-phosphate cyclase1e-31137
NC_000868:571500:5981025981025991301029Pyrococcus abyssi GE5, complete genomeRNA 3'-terminal-phosphate cyclase1e-26120