Pre_GI: BLASTP Hits

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Query: NC_007492:2203220:2219297 Pseudomonas fluorescens PfO-1, complete genome

Start: 2219297, End: 2220844, Length: 1548

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014148:602864:6251166251166267441629Planctomyces limnophilus DSM 3776 chromosome, complete genomeTROVE domain protein2e-111403
NC_004663:2184204:2186717218671721882041488Bacteroides thetaiotaomicron VPI-5482, complete genomeputative ribonucleoprotein-related protein4e-31136
NC_016627:841269:8485878485878500501464Clostridium clariflavum DSM 19732 chromosome, complete genomeTROVE domain-containing protein8e-31135
NC_013595:7716759:7733414773341477350751662Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-21104
NC_014628:168994:1926941926941943341641Paenibacillus polymyxa SC2 plasmid pSC2, complete sequenceTROVE domain protein2e-1790.5
NC_018524:4564493:4564493456449345660641572Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeTROVE domain protein1e-1688.2
NC_006361:4149701:4153001415300141545961596Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-1169.7
NC_014151:4021394:4023586402358640251811596Cellulomonas flavigena DSM 20109 chromosome, complete genomeTROVE domain protein7e-1169.3
NC_013510:888542:9097799097799113351557Thermomonospora curvata DSM 43183, complete genomeTROVE domain protein2e-0964.3