Pre_GI: BLASTP Hits

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Query: NC_007481:3167434:3175888 Pseudoalteromonas haloplanktis TAC125 chromosome I, complete

Start: 3175888, End: 3176850, Length: 963

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:1588742:161505816150581615999942Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein4e-24112
NC_020209:3874844:389534438953443896231888Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-23110
NC_007969:1076287:109208310920831093012930Psychrobacter cryohalolentis K5, complete genomehypothetical protein1e-1584.3