Pre_GI: BLASTP Hits

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Query: NC_007384:307013:324220 Shigella sonnei Ss046, complete genome

Start: 324220, End: 325884, Length: 1665

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. A leading cause of dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. This extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010473:1384000:1387278138727813889421665Escherichia coli str. K-12 substr. DH10B, complete genome3-(3-hydroxyphenyl)propionate hydroxylase01134
NC_008146:4019711:4040409404040940421301722Mycobacterium sp. MCS, complete genomemonooxygenase, FAD-binding protein5e-143508
NC_008705:4053070:4074891407489140766121722Mycobacterium sp. KMS, complete genomemonooxygenase, FAD-binding5e-143508
NC_009921:3384116:3407259340725934089531695Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding3e-116419
NC_013929:1670402:1672755167275516744431689Streptomyces scabiei 87.22 chromosome, complete genome3-(3-hydroxyphenyl)propionate hydroxylase1e-78294
NC_018691:1322389:1324592132459213261931602Alcanivorax dieselolei B5 chromosome, complete genomeMonooxygenase, FAD-binding protein5e-71269
NC_008543:2871747:2894682289468228963941713Burkholderia cenocepacia HI2424 chromosome 2, complete sequencemonooxygenase, FAD-binding3e-65249
NC_008061:2368517:2370588237058823723001713Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencemonooxygenase, FAD-binding3e-65249
NC_010515:1375091:1379117137911713808141698Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencemonooxygenase FAD-binding1e-64247
NC_011001:63986:8490284902866141713Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative flavoprotein monooxygenase3e-63243
NC_013131:7437831:7453032745303274546451614Catenulispora acidiphila DSM 44928, complete genomemonooxygenase FAD-binding5e-61236
NC_008391:1210451:1231979123197912335411563Burkholderia cepacia AMMD chromosome 2, complete sequencemonooxygenase, FAD-binding1e-59231
NC_009511:1746631:1745057174505717466341578Sphingomonas wittichii RW1 chromosome, complete genomeFAD-binding monooxygenase3e-58226
NC_015381:1623587:1667332166733216689151584Burkholderia gladioli BSR3 chromosome 1, complete sequencemonooxygenase FAD-binding protein1e-55218
NC_008595:1792318:1798825179882518002521428Mycobacterium avium 104, complete genomemonooxygenase, FAD-binding7e-53208
NC_012982:2772976:2791800279180027932781479Hirschia baltica ATCC 49814, complete genomemonooxygenase FAD-binding2e-48194
NC_014168:1724993:1726011172601117276091599Segniliparus rotundus DSM 44985 chromosome, complete genomemonooxygenase FAD-binding protein2e-42174
NC_016935:1636278:1731742173174217333641623Paenibacillus mucilaginosus 3016 chromosome, complete genomemonooxygenase FAD-binding protein2e-40167
NC_015690:1109335:1166438116643811680601623Paenibacillus mucilaginosus KNP414 chromosome, complete genomemonooxygenase FAD-binding protein2e-40167
NC_007951:1928906:1928906192890619306181713Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative 3-(3-hydroxy- phenyl)propionate hydroxylase (MhpA)2e-40167
NC_008595:2546696:2551419255141925524831065Mycobacterium avium 104, complete genomemonooxygenase, FAD-binding9e-39161
NC_013037:2851940:2873882287388228755251644Dyadobacter fermentans DSM 18053, complete genomemonooxygenase FAD-binding6e-36152
NC_013929:3953046:3958597395859739600961500Streptomyces scabiei 87.22 chromosome, complete genomemonooxygenase5e-34145
NC_016590:1183470:1184291118429111859041614Burkholderia sp. YI23 chromosome 3, complete sequencemonooxygenase FAD-binding protein1e-33144
NC_017186:1320186:1326739132673913281571419Amycolatopsis mediterranei S699 chromosome, complete genomeFAD-dependent oxidoreductase3e-33143
NC_014318:1320170:1326723132672313281411419Amycolatopsis mediterranei U32 chromosome, complete genomeFAD-dependent oxidoreductase3e-33143
NC_009921:4903688:4915169491516949166081440Frankia sp. EAN1pec, complete genomePentachlorophenol monooxygenase9e-33142
NC_014013:112008:1276641276641288811218Sphingobium japonicum UT26S chromosome 2, complete genomeputative monooxygenase4e-32139
NC_017111:2248096:2272897227289722739641068Acetobacter pasteurianus IFO 3283-32, complete genomemonooxygenase FAD-binding2e-31137
NC_013209:2248119:2272920227292022739871068Acetobacter pasteurianus IFO 3283-01, complete genomemonooxygenase FAD-binding2e-31137
NC_010162:10962500:1097856010978560109800681509Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-31137
NC_010172:3413392:3413392341339234148731482Methylobacterium extorquens PA1, complete genomemonooxygenase FAD-binding2e-30134
NC_010162:9311465:9313154931315493149621809Sorangium cellulosum 'So ce 56', complete genomePheA/TfdB family FAD-binding monooxygenase2e-30134
NC_007777:2459357:2477263247726324787981536Frankia sp. CcI3, complete genomemonooxygenase, FAD-binding3e-30133
NC_011094:1584038:1590088159008815915961509Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-29130
NC_016857:1576636:1579493157949315810281536Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-29130
NC_017046:1574057:1579377157937715809121536Salmonella enterica subsp. enterica serovar Typhimurium str. 798monooxygenase3e-29130
NC_011149:1578451:1591287159128715927951509Salmonella enterica subsp. enterica serovar Agona str. SL483,monooxygenase, FAD-binding2e-29130
NC_003197:1611302:1622640162264016241481509Salmonella typhimurium LT2, complete genomehypothetical protein4e-29129
NC_016810:1576636:1579493157949315810011509Salmonella enterica subsp. enterica serovar Typhimurium strputative monooxygenase4e-29129
NC_016856:1621279:1632617163261716341251509Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-29129
NC_016860:1614280:1620330162033016218381509Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-29129
NC_016863:1575488:1580808158080815823161509Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-29129
NC_008278:2813362:2816780281678028183601581Frankia alni ACN14a, complete genomeputative polyketide oxygenase/hydroxylase1e-28128
NC_010338:588000:5895335895335910711539Caulobacter sp. K31, complete genomemonooxygenase FAD-binding4e-28126
NC_013406:3650300:3660192366019236617541563Paenibacillus sp. Y412MC10 chromosome, complete genomemonooxygenase FAD-binding protein7e-28125
NC_013595:5176000:5192010519201051935571548Streptosporangium roseum DSM 43021, complete genomehypothetical protein9e-28125
NC_015761:1488807:1500144150014415016521509Salmonella bongori NCTC 12419, complete genomeoxygenase2e-27124
NC_009921:3551036:3593125359312535943511227Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding4e-27123
NC_015953:46732:7931479314809271614Streptomyces sp. SirexAA-E chromosome, complete genomemonooxygenase FAD-binding protein6e-27122
NC_010511:7024412:7027749702774970292841536Methylobacterium sp. 4-46 chromosome, complete genomeFAD-binding monooxygenase2e-26120
NC_009142:3943829:3948118394811839506402523Saccharopolyspora erythraea NRRL 2338, complete genomeputative polyketide oxygenase/hydroxylase2e-26120
NC_013947:613774:6314386314386329041467Stackebrandtia nassauensis DSM 44728 chromosome, complete genomemonooxygenase FAD-binding protein2e-26120
NC_013093:2230171:2232011223201122334381428Actinosynnema mirum DSM 43827, complete genomemonooxygenase FAD-binding6e-26119
NC_016047:1234743:1235981123598112375491569Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeFAD-dependent monooxygenase2e-24114
NC_006513:1949751:1964804196480419664831680Azoarcus sp. EbN1, complete genomehypothetical protein2e-24114
NC_014643:892138:9002229002229017001479Rothia dentocariosa ATCC 17931 chromosome, complete genomepentachlorophenol monooxygenase2e-24114
NC_010557:207846:2094962094962110911596Burkholderia ambifaria MC40-6 chromosome 3, complete sequencemonooxygenase FAD-binding4e-24113
NC_019673:3607958:3614658361465836161211464Saccharothrix espanaensis DSM 44229 complete genomeMonooxygenase, FAD-binding protein5e-24113
NC_015690:4643869:4659078465907846605741497Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein7e-24112
NC_016935:4367000:4396165439616543976611497Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein9e-24112
NC_011881:89705:1031991031991048661668Arthrobacter chlorophenolicus A6 plasmid pACHL02, completemonooxygenase FAD-binding2e-23111
NC_010524:4788753:4810441481044148121771737Leptothrix cholodnii SP-6, complete genomemonooxygenase FAD-binding4e-23110
NC_011894:6888562:6889870688987068914261557Methylobacterium nodulans ORS 2060, complete genomemonooxygenase FAD-binding4e-23110
NC_013440:4235489:4250039425003942515501512Haliangium ochraceum DSM 14365, complete genomemonooxygenase FAD-binding protein3e-23110
NC_015381:1705383:1723640172364017253011662Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-23110
NC_015677:3339181:3339826333982633415681743Ramlibacter tataouinensis TTB310 chromosome, complete genomePentachlorophenol 4-monooxygenase2e-23110
NC_016111:6175975:6182314618231461836121299Streptomyces cattleya NRRL 8057, complete genome2-polyprenyl-6-methoxyphenol 4-hydroxylase1e-22108
NC_003155:921494:9237789237789253701593Streptomyces avermitilis MA-4680, complete genomemonooxygenase8e-23108
NC_016114:7282882:7285076728507672866591584Streptomyces flavogriseus ATCC 33331 chromosome, complete genomemonooxygenase FAD-binding protein7e-23108
NC_007333:1411050:1419335141933514207951461Thermobifida fusca YX, complete genomehypothetical protein2e-22107
NC_016078:3130573:3130573313057331323121740Pelagibacterium halotolerans B2 chromosome, complete genomeputative dichlorophenol monooxygenase/hydroxylase7e-22105
NC_013510:170199:1711941711941726751482Thermomonospora curvata DSM 43183, complete genomemonooxygenase FAD-binding protein8e-22105
NC_004193:375416:6671986671986686881491Oceanobacillus iheyensis HTE831, complete genomepentachlorophenol-4-monooxygenase8e-22105
NC_007953:1043957:1042333104233310439641632Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative flavoprotein monooxygenase1e-21104
NC_010804:831000:8498428498428516291788Burkholderia multivorans ATCC 17616 chromosome 1, completeputative 2,4-dichlorophenol hydroxylase2e-21104
NC_012917:3241196:3280889328088932823221434Pectobacterium carotovorum subsp. carotovorum PC1, complete genomemonooxygenase FAD-binding7e-21102
NC_003888:5790104:5791641579164157935241884Streptomyces coelicolor A3(2), complete genomepolyketide hydroxylase2e-20101
NC_014210:2277971:2279008227900822807921785Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,monooxygenase FAD-binding protein4e-20100
NC_010511:7553703:7568955756895575708591905Methylobacterium sp. 4-46 chromosome, complete genomephenol 2-monooxygenase3e-1997.4
NC_015957:196000:2153312153312169651635Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-binding monooxygenase6e-1996.3
NC_008726:4725389:4727334472733447291271794Mycobacterium vanbaalenii PYR-1, complete genomemonooxygenase, FAD-binding1e-1895.1
NC_009380:2310000:2327514232751423289741461Salinispora tropica CNB-440 chromosome, complete genomeFAD-binding monooxygenase3e-1894
NC_014010:2689682:2709389270938927114192031Candidatus Puniceispirillum marinum IMCC1322 chromosome, completephenol 2-monooxygenase3e-1894
NC_007333:1411050:1425799142579914272141416Thermobifida fusca YX, complete genomeputative rifampin monooxygenase4e-1893.6
NC_016582:93754:1090711090711105881518Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative oxygenase4e-1893.2
NC_009921:3473854:3512387351238735142221836Frankia sp. EAN1pec, complete genomemonooxygenase FAD-binding7e-1892.8
NC_013172:466300:4873254873254888571533Brachybacterium faecium DSM 4810, complete genome2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase1e-1791.7
NC_011666:1572487:1582885158288515846811797Methylocella silvestris BL2, complete genomemonooxygenase FAD-binding3e-1790.5
NC_011894:901630:9036739036739055771905Methylobacterium nodulans ORS 2060, complete genomePhenol hydroxylase domain protein dimerisation3e-1790.5
NC_011894:3319856:3336800333680033387041905Methylobacterium nodulans ORS 2060, complete genomePhenol hydroxylase domain protein dimerisation5e-1789.7
NC_017249:263873:2660002660002676101611Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1687.8
NC_020911:3076791:3099027309902731007991773Octadecabacter antarcticus 307, complete genomeputative 3-[3-hydroxy-phenyl]propionate/3-hydroxycinnamic acid hydroxylase2e-1584
NC_008711:3701635:3711492371149237129431452Arthrobacter aurescens TC1, complete genomeFAD-binding monooxygenase, PheA/TfdB family6e-1582.8
NC_017167:1648913:1759813175981317610421230Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1monooxygenase FAD-binding protein3e-1480.9
NC_007337:10464:1768817688194841797Ralstonia eutropha JMP134 plasmid 1, complete sequenceMonooxygenase, FAD-binding5e-1479.7
NC_020453:1785473:1788214178821417898151602Agromonas oligotrophica S58 DNA, complete genomemonooxygenase, FAD-binding1e-1379
NC_010505:1581429:1581429158142915831591731Methylobacterium radiotolerans JCM 2831, complete genomemonooxygenase FAD-binding4e-1376.6
NC_014623:1829000:1835557183555718370081452Stigmatella aurantiaca DW4/3-1 chromosome, complete genomearomatic-ring hydroxylase9e-1375.5
NC_007337:10464:2676526765285251761Ralstonia eutropha JMP134 plasmid 1, complete sequenceMonooxygenase, FAD-binding6e-1272.8
NC_008726:4725389:4732794473279447340111218Mycobacterium vanbaalenii PYR-1, complete genomemonooxygenase, FAD-binding1e-1068.2
NC_015957:5082172:5097645509764550995101866Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-binding monooxygenase4e-1067
NC_003198:1463253:1471213147121314723751163Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0964.7
NC_008321:3964414:3980665398066539818881224Shewanella sp. MR-4, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family3e-0963.9
NC_008322:722612:7226127226127238351224Shewanella sp. MR-7, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family1e-0862
NC_011884:1998559:2016268201626820175871320Cyanothece sp. PCC 7425, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family1e-0861.6
NC_014391:2579919:260450726045072605169663Micromonospora aurantiaca ATCC 27029 chromosome, complete genomemonooxygenase3e-0860.5
NC_012803:3691:3455934559357761218Micrococcus luteus NCTC 2665, complete genome2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase6e-0859.7
NC_009921:3473854:351765335176533518339687Frankia sp. EAN1pec, complete genomehypothetical protein7e-0859.3
NC_012912:4071859:4076590407659040778011212Dickeya zeae Ech1591, complete genomeUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family9e-0858.9
NC_007511:3512100:3533098353309835343301233Burkholderia sp. 383 chromosome 2, complete sequence4-hydroxybenzoate 3-monooxygenase1e-0655.5