Pre_GI: BLASTP Hits

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Query: NC_007384:307013:308731 Shigella sonnei Ss046, complete genome

Start: 308731, End: 309189, Length: 459

Host Lineage: Shigella sonnei; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. A leading cause of dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. This extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism is the leading cause of dysentery in industrialized countries. The disease is usually less severe than other types of Shigella, causing mild diarrhea and dehydration.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:313540:315258315258315716459Escherichia coli O26:H11 str. 11368 chromosome, complete genomexanthine-guanine phosphoribosyltransferase1e-84310
NC_004431:364000:364105364105364563459Escherichia coli CFT073, complete genomexanthine phosphoribosyltransferase3e-84310
NC_008563:287136:288854288854289312459Escherichia coli APEC O1, complete genomexanthine-guanine phosphoribosyltransferase4e-84309
NC_015761:299386:299386299386299844459Salmonella bongori NCTC 12419, complete genomexanthine-guanine phosphoribosyltransferase6e-84308
NC_016514:891772:893490893490893948459Enterobacter cloacae EcWSU1 chromosome, complete genomexanthine phosphoribosyltransferase2e-83306
NC_014618:3700640:371819237181923718650459Enterobacter cloacae SCF1 chromosome, complete genomexanthine phosphoribosyltransferase6e-83305
NC_020063:3690308:374754937475493748007459Enterobacteriaceae bacterium strain FGI 57, complete genomePRPP-binding protein, adenine/guanine phosphoribosyltransferase3e-82303
NC_020260:3004500:302207430220743022532459Cronobacter sakazakii Sp291, complete genomexanthine-guanine phosphoribosyltransferase2e-81300
NC_013282:923500:923678923678924154477Cronobacter turicensis, complete genomeXanthine phosphoribosyltransferase5e-81298
NC_012917:3684840:370646937064693706927459Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeXanthine phosphoribosyltransferase5e-80295
NC_004547:3866439:388589938858993886357459Erwinia carotovora subsp. atroseptica SCRI1043, complete genomexanthine phosphoribosyltransferase1e-79294
NC_004088:1075454:108918610891861089644459Yersinia pestis KIM, complete genomexanthine phosphoribosyltransferase2e-77287
NC_003143:3583468:358893835889383589396459Yersinia pestis CO92, complete genomexanthine phosphoribosyltransferase2e-77287
NC_008150:3015000:302061630206163021074459Yersinia pestis Antiqua, complete genomexanthine-guanine phosphoribosyltransferase2e-77287
NC_008149:1002453:101618510161851016643459Yersinia pestis Nepal516, complete genomexanthine-guanine phosphoribosyltransferase2e-77287
NC_010465:3597000:360166236016623602120459Yersinia pseudotuberculosis YPIII, complete genomeXanthine phosphoribosyltransferase2e-77287
NC_006155:1074298:108882410888241089282459Yersinia pseudotuberculosis IP 32953, complete genomexanthine phosphoribosyltransferase2e-77287
NC_010159:3502350:350782035078203508278459Yersinia pestis Angola, complete genomexanthine phosphoribosyltransferase2e-77287
NC_005810:754340:768922768922769380459Yersinia pestis biovar Microtus str. 91001, complete genomexanthine-guanine phosphoribosyltransferase2e-77287
NC_010634:1056441:107096710709671071425459Yersinia pseudotuberculosis PB1/+, complete genomephosphoribosyltransferase2e-77287
NC_017265:3375463:338056833805683381026459Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,guanine-xanthine phosphoribosyltransferase2e-77287
NC_017168:2158839:217257121725712173029459Yersinia pestis A1122 chromosome, complete genomexanthine-guanine phosphoribosyltransferase2e-77287
NC_017160:3560153:356562335656233566081459Yersinia pestis D182038 chromosome, complete genomexanthine phosphoribosyltransferase2e-77287
NC_017154:3576256:358172635817263582184459Yersinia pestis D106004 chromosome, complete genomexanthine phosphoribosyltransferase2e-77287
NC_014029:3633955:363942536394253639883459Yersinia pestis Z176003 chromosome, complete genomexanthine phosphoribosyltransferase2e-77287
NC_009708:3542336:354780635478063548264459Yersinia pseudotuberculosis IP 31758 chromosome, complete genomexanthine-guanine phosphoribosyltransferase2e-77287
NC_009381:3228500:323320232332023233660459Yersinia pestis Pestoides F chromosome, complete genomexanthine-guanine phosphoribosyltransferase2e-77287
NC_020211:996497:998297998297998755459Serratia marcescens WW4, complete genomeguanine-hypoxanthine phosphoribosyltransferase7e-77285
NC_013508:876431:878285878285878743459Edwardsiella tarda EIB202, complete genomexanthine-guanine phosphoribosyltransferase8e-76281
NC_009655:195500:212545212545213003459Actinobacillus succinogenes 130Z chromosome, complete genomexanthine-guanine phosphoribosyltransferase5e-67252
NC_011420:2803196:281687028168702817355486Rhodospirillum centenum SW, complete genomexanthine phosphoribosyltransferase, putative1e-39161
NC_014217:2172464:218391721839172184423507Starkeya novella DSM 506 chromosome, complete genomeXanthine phosphoribosyltransferase4e-39159
NC_007643:3799425:382937938293793829936558Rhodospirillum rubrum ATCC 11170, complete genomeXanthine-guanine phosphoribosyltransferase1e-29128
NC_012726:115500:135014135014135646633Sulfolobus islandicus M.16.4 chromosome, complete genomephosphoribosyltransferase1e-0755.5
NC_016782:2058967:206289620628962063396501Corynebacterium diphtheriae 241 chromosome, complete genomeputative purine phosphoribosyltransferase5e-0753.1
NC_016786:2059564:206349320634932063993501Corynebacterium diphtheriae HC01 chromosome, complete genomeputative purine phosphoribosyltransferase5e-0753.1
NC_016788:2115428:211635621163562116856501Corynebacterium diphtheriae HC04 chromosome, complete genomeputative purine phosphoribosyltransferase5e-0753.1
NC_016790:2027332:202826020282602028760501Corynebacterium diphtheriae VA01 chromosome, complete genomeputative purine phosphoribosyltransferase5e-0753.1
NC_002935:2103677:210760621076062108106501Corynebacterium diphtheriae NCTC 13129, complete genomePutative purine phosphoribosyltransferase7e-0752.8
NC_016512:679688:679688679688680191504Propionibacterium acnes TypeIA2 P.acn17 chromosome, completephosphoribosyl transferase domain protein1e-0652
NC_016511:678582:680303680303680806504Propionibacterium acnes TypeIA2 P.acn31 chromosome, completephosphoribosyl transferase domain protein1e-0652
NC_011529:1685834:168889216888921689356465Thermococcus onnurineus NA1, complete genomexanthine/guanine phosphoribosyltransferase5e-0650.1