Pre_GI: BLASTP Hits

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Query: NC_007347:1239982:1259857 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1259857, End: 1260957, Length: 1101

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013939:1417750:142083614208361421834999Deferribacter desulfuricans SSM1, complete genomeribonuclease Z5e-41168
NC_011146:482440:4885424885424896241083Geobacter bemidjiensis Bem, complete genomemetal-dependent hydrolase of the beta-lactamase superfamily III-like protein3e-32139
NC_014973:4630132:4651635465163546527141080Geobacter sp. M18 chromosome, complete genomebeta-lactamase domain-containing protein8e-32138
NC_014958:514225:5274775274775285231047Deinococcus maricopensis DSM 21211 chromosome, complete genomebeta-lactamase domain-containing protein6e-21102
NC_015931:71361:114385114385115299915Pyrolobus fumarii 1A, complete genomeribonuclease Z3e-1169.7
NC_014033:1664500:168450316845031685417915Prevotella ruminicola 23 chromosome, complete genomeribonuclease Z4e-1066.2
NC_020054:4161049:416104941610494162035987Fibrella aestuarina BUZ 2 drat genomebeta-lactamase domain protein2e-0963.5
NC_015416:2692536:270730127073012708218918Methanosaeta concilii GP-6 chromosome, complete genomeribonuclease Z9e-0961.6
NC_013771:1171251:119493611949361195904969Cyanobacterium UCYN-A, complete genomeRNAse Z2e-0860.5
NC_007333:1743890:175683417568341757790957Thermobifida fusca YX, complete genomeribonuclease Z4e-0859.3
NC_017093:835260:838995838995839900906Actinoplanes missouriensis 431, complete genomeputative ribonuclease Z4e-0859.3