Pre_GI: BLASTP Hits

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Query: NC_007347:1:24982 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 24982, End: 28596, Length: 3615

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007348:2011957:2025768202576820292383471Ralstonia eutropha JMP134 chromosome 2, complete sequenceImcF-related:Protein of unknown function DUF121501158
NC_009255:1250939:1271735127173512752893555Burkholderia vietnamiensis G4 chromosome 2, complete sequenceImcF domain-containing protein0870
NC_009255:2044291:2047201204720120507283528Burkholderia vietnamiensis G4 chromosome 2, complete sequenceImcF domain-containing protein0868
NC_012721:710887:7242107242107277733564Burkholderia glumae BGR1 chromosome 2, complete genomeImcF-related protein0769
NC_014539:3619511:3622840362284036263163477Burkholderia sp. CCGE1003 chromosome 1, complete sequenceImcF domain-containing protein0762
NC_012721:1395417:1398827139882714023513525Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein0639
NC_010552:592154:6071386071386109563819Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF12150637
NC_016626:400080:4228984228984264283531Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein6e-180632
NC_012721:240000:2571702571702606913522Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein3e-179629
NC_014118:1171411:1172998117299811765823585Burkholderia sp. CCGE1002 chromosome chromosome 2, completeImcF domain protein8e-179628
NC_014121:1822895:1834869183486918383423474Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpL1e-158561
NC_016612:4823529:4823529482352948269993471Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system protein ImpL1e-157558
NC_017060:125480:1401031401031435193417Rahnella aquatilis HX2 plasmid PRA1, complete sequenceImcF domain-containing protein2e-157557
NC_015062:130359:1432731432731466893417Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceImcF domain protein2e-157557
NC_005126:3812054:3830821383082138341713351Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-155551
NC_005126:3812054:3843641384364138470123372Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-155549
NC_013956:4579759:4579759457975945832923534Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-154546
NC_005126:3812054:3819697381969738230683372Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-153543
NC_013282:2026083:2050468205046820537793312Cronobacter turicensis, complete genomehypothetical protein5e-153542
NC_012731:2302974:2318423231842323219263504Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-152540
NC_009436:3117661:3154619315461931579033285Enterobacter sp. 638, complete genomeImcF domain-containing protein4e-151536
NC_009708:2788855:2820654282065428240763423Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-151536
NC_010067:2529750:2532006253200625353773372Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-151536
NC_009648:1487692:1505225150522515085993375Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein6e-151535
NC_017265:2586729:2586729258672925901513423Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein9e-151535
NC_017168:3977767:3977767397776739811893423Yersinia pestis A1122 chromosome, complete genomehypothetical protein9e-151535
NC_009381:1682000:1683661168366116870833423Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein9e-151535
NC_008149:2802392:2802392280239228058143423Yersinia pestis Nepal516, complete genomemembrane protein9e-151535
NC_004088:2966331:2966331296633129697533423Yersinia pestis KIM, complete genomehypothetical protein9e-151535
NC_010465:2820500:2847223284722328506453423Yersinia pseudotuberculosis YPIII, complete genomeImcF domain protein1e-149531
NC_012962:3568046:3578063357806335814103348Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein of y. pestis2e-148527
NC_011283:942594:9464689464689498033336Klebsiella pneumoniae 342 chromosome, complete genomeImcF domain-containing protein3e-148526
NC_012962:2639500:2648526264852626518913366Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein of y. pestis4e-146519
NC_009648:3476000:3487423348742334905003078Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-146518
NC_005126:4919689:4927191492719149305503360Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-144513
NC_012962:4427000:4437011443701144403073297Photorhabdus asymbiotica, complete genomehypothetical protein4e-144513
NC_016612:5600177:5603309560330956067283420Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-143509
NC_008563:3119284:3133547313354731368853339Escherichia coli APEC O1, complete genomehypothetical protein2e-142507
NC_010501:3575726:3580163358016335835073345Pseudomonas putida W619, complete genomeImcF domain protein1e-141504
NC_009648:2465613:2467510246751024709203411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein7e-141502
NC_011283:2103500:2116315211631521192812967Klebsiella pneumoniae 342 chromosome, complete genomeImcF-related family protein6e-140499
NC_012731:3193880:3195777319577731991933417Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-140499
NC_016845:3238507:3240404324040432438143411Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-139495
NC_014837:3766426:3791881379188137952373357Pantoea sp. At-9b chromosome, complete genomeImcF domain-containing protein1e-137491
NC_009778:1956225:1976281197628119776511371Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-93343
NC_014306:4376012:4390795439079543938933099Erwinia billingiae Eb661, complete genomePutative Type VI secretion system, ImcF domain-containing protein1e-85318
NC_014323:816027:8334198334198372943876Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein1e-52209
NC_014323:4619344:4619344461934446231443801Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein4e-51204
NC_014931:6031645:6031645603164560354903846Variovorax paradoxus EPS chromosome, complete genometype VI secretion protein IcmF1e-45186
NC_007510:409843:4438784438784478253948Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein4e-45184
NC_010804:324396:3470683470683501543087Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-44182
NC_010084:3173757:3173757317375731777043948Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein IcmF1e-44182
NC_005773:106000:1441241441241480443921Pseudomonas syringae pv. phaseolicola 1448A, complete genomeImcF-related family1e-39166
NC_007005:5882205:5882205588220558861373933Pseudomonas syringae pv. syringae B728a, complete genomeImcF-related:Protein of unknown function DUF12152e-39165
NC_014310:811977:8415608415608454893930Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein2e-36155
NC_003296:941920:9611259611259650663942Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN1e-35152
NC_014355:1865003:1882727188272718863563630Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-30135
NC_012962:293976:3021943021943057393546Photorhabdus asymbiotica, complete genomehypothetical protein5e-1687.8
NC_012913:1832500:1849033184903318525303498Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein IcmF7e-1480.5
NC_005126:349658:3568883568883604333546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1379.3
NC_005126:349658:3824313824313859763546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1379
NC_013892:274297:2849322849322885013570Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein8e-1377
NC_008570:2014151:2014151201415120176363486Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImcF family protein9e-1377
NC_011740:1991941:2010341201034120138623522Escherichia fergusonii ATCC 35469, complete genomeIcmF-like protein2e-1275.9
NC_016816:1823127:1823127182312718267533627Pantoea ananatis LMG 5342, complete genometype VI secretion protein IcmF2e-1275.5
NC_003143:4006884:4012390401239040159233534Yersinia pestis CO92, complete genomehypothetical protein8e-1273.9
NC_009381:222735:2282322282322317653534Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-1273.9
NC_014029:3958811:3964317396431739678503534Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-1273.9
NC_017154:3898925:3904431390443139079643534Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-1273.9
NC_017168:1631052:1636558163655816400913534Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-1273.9
NC_017265:4265659:4278317427831742818503534Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-1273.9
NC_010634:4234932:4246637424663742501703534Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein IcmF7e-1273.9
NC_006155:4302826:4315540431554043190733534Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein9e-1273.6
NC_010465:429095:4346014346014381343534Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein IcmF8e-1273.6
NC_009708:372422:3779283779283814613534Yersinia pseudotuberculosis IP 31758 chromosome, complete genomelipoprotein8e-1273.6
NC_004578:6138669:6157343615734361609213579Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1068.6
NC_014228:4331327:4338297433829743419023606Xenorhabdus nematophila ATCC 19061, complete genomeConserved hypothetical protein (probable component of SST VI cluster)4e-1068.2
NC_013421:1173051:1173051117305111765483498Pectobacterium wasabiae WPP163, complete genometype VI secretion protein IcmF2e-0758.9
NC_015968:4117835:4135929413592941395883660Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein IcmF5e-0757.8
NC_009439:101174:1011741011741047133540Pseudomonas mendocina ymp, complete genomeImcF domain-containing protein8e-0757