Pre_GI: BLASTP Hits

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Query: NC_007347:1:20403 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 20403, End: 22733, Length: 2331

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015136:1301576:1317230131723013196022373Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein2e-148526
NC_012721:710887:7196107196107220152406Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein7e-128458
NC_010717:3868000:3878818387881838810732256Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein5e-81302
NC_005085:24623:3211132111342522142Chromobacterium violaceum ATCC 12472, complete genomeprobable hydroxyethylthiazole kinase3e-72273
NC_015136:813701:8202798202798226302352Burkholderia sp. CCGE1001 chromosome 1, complete sequencepeptidase M232e-63244
NC_004088:2966331:2973790297379029759522163Yersinia pestis KIM, complete genomehypothetical protein8e-57222
NC_005810:1467772:1500567150056715027502184Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-57222
NC_008150:844727:8855268855268877092184Yersinia pestis Antiqua, complete genomehypothetical protein8e-57222
NC_003143:1630000:1671662167166216738452184Yersinia pestis CO92, complete genomehypothetical protein8e-57222
NC_008149:2802392:2809851280985128120342184Yersinia pestis Nepal516, complete genomehypothetical protein8e-57222
NC_009381:1682000:1691120169112016933032184Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-57222
NC_017168:3977767:3985226398522639874092184Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-57222
NC_017265:2586729:2594188259418825963712184Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-57222
NC_009708:874770:8993168993169015382223Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeM23 peptidase domain-containing protein5e-53209
NC_010634:3720214:3731568373156837337902223Yersinia pseudotuberculosis PB1/+, complete genomepeptidase M236e-53209
NC_006155:3805640:3813445381344538157422298Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-53209
NC_010634:3720214:3726496372649637287932298Yersinia pseudotuberculosis PB1/+, complete genomepeptidase M237e-53209
NC_008150:317903:3435903435903457432154Yersinia pestis Antiqua, complete genomehypothetical protein7e-53209
NC_008149:3556999:3568381356838135705342154Yersinia pestis Nepal516, complete genomehypothetical protein7e-53209
NC_006155:3805640:3818487381848738207092223Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein5e-53209
NC_005810:3917254:3944624394462439468462223Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein5e-53209
NC_017265:809943:8346228346228368442223Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-53209
NC_017168:3286:3065430654328762223Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-53209
NC_017154:1644404:1679774167977416819962223Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-53209
NC_014029:1702338:1737701173770117399232223Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-53209
NC_003143:1059580:1072398107239810746202223Yersinia pestis CO92, complete genomehypothetical protein5e-53209
NC_004088:3689000:3700505370050537027272223Yersinia pestis KIM, complete genomehypothetical protein5e-53209
NC_017160:1628500:1660271166027116625682298Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-52208
NC_010159:172469:1740161740161763132298Yersinia pestis Angola, complete genomeM23 peptidase domain protein2e-52208
NC_005810:3917254:3949601394960139518982298Yersinia pestis biovar Microtus str. 91001, complete genomeputative kinase2e-52208
NC_004088:3689000:3695454369545436977512298Yersinia pestis KIM, complete genomehypothetical protein2e-52208
NC_008150:317903:3484873484873507842298Yersinia pestis Antiqua, complete genomeputative kinase2e-52208
NC_008149:3556999:3563280356328035655772298Yersinia pestis Nepal516, complete genomekinase2e-52208
NC_003143:1059580:1067376106737610696732298Yersinia pestis CO92, complete genomeputative kinase2e-52208
NC_017168:3286:3560135601378982298Yersinia pestis A1122 chromosome, complete genomeputative kinase2e-52208
NC_017265:809943:8396188396188419152298Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative kinase2e-52208
NC_009708:874770:9042999042999065962298Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeM23 peptidase domain-containing protein3e-52207
NC_004088:2966331:2977173297717329794732301Yersinia pestis KIM, complete genomehypothetical protein8e-52206
NC_009708:2788855:2830938283093828332382301Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeM23 peptidase domain-containing protein6e-52206
NC_017154:1644404:1684760168476016870602301Yersinia pestis D106004 chromosome, complete genomeputative kinase1e-51205
NC_008149:2802392:2813234281323428154652232Yersinia pestis Nepal516, complete genomehypothetical protein2e-51204
NC_008150:844727:8820958820958843262232Yersinia pestis Antiqua, complete genomehypothetical protein2e-51204
NC_009381:1682000:1694503169450316967342232Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-51204
NC_003143:1630000:1668162166816216704622301Yersinia pestis CO92, complete genomehypothetical protein2e-51204
NC_005810:1467772:1497067149706714993672301Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-51204
NC_017168:3977767:3988609398860939909092301Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-51204
NC_017265:2586729:2597571259757125998712301Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative kinase2e-51204
NC_010625:670482:6788266788266810662241Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencepeptidase M23B2e-51204
NC_014029:1702338:1742667174266717449672301Yersinia pestis Z176003 chromosome, complete genomeputative kinase2e-51204
NC_017160:1628500:1665374166537416676742301Yersinia pestis D182038 chromosome, complete genomeputative kinase2e-51204
NC_009708:2788855:2828245282824528297381494Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeM23 peptidase domain-containing protein4e-51203
NC_013956:4579759:4586476458647645887072232Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-51203
NC_009648:1487692:1497730149773014994901761Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative membrane proteins2e-48194
NC_015856:4975815:4985279498527949875912313Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein1e-31138
NC_010625:670482:6826506826506846852036Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence6e-22106
NC_010067:2488141:2514733251473325166971965Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1688.6
NC_009439:101174:1085661085661117303165Pseudomonas mendocina ymp, complete genomeglycoside hydrolase family protein9e-1686.3
NC_017025:1761918:176969117696911770404714Flavobacterium indicum GPTSA100-9, complete genomeGlycoside hydrolase family 19, putative chitinase2e-1585.1
NC_004578:5916711:5924253592425359262772025Pseudomonas syringae pv. tomato str. DC3000, complete genomeEF hand domain protein2e-1481.6
NC_010717:3868000:3873652387365238765462895Xanthomonas oryzae pv. oryzae PXO99A, complete genomeEF hand domain protein4e-1480.5
NC_014500:4691915:4699276469927647015822307Dickeya dadantii 3937 chromosome, complete genomeEF hand domain-containing protein4e-1377.4
NC_014168:1724993:1731346173134617328481503Segniliparus rotundus DSM 44985 chromosome, complete genomefamily 19 glycoside hydrolase7e-1376.6
NC_013971:3117000:3129058312905831318202763Erwinia amylovora ATCC 49946 chromosome, complete genomechitinase1e-1172.8
NC_013961:629307:6394816394816422432763Erwinia amylovora, complete genomehypothetical protein1e-1172.4
NC_008570:2014151:2021749202174920243042556Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-1171.6
NC_012912:325913:332536332536333162627Dickeya zeae Ech1591, complete genomeglycoside hydrolase family 193e-1170.9
NC_010552:592154:6011786011786038052628Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechitinase-like protein4e-1067.4
NC_013592:4295449:431316143131614313787627Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 194e-1067.4
NC_017986:4124335:412990241299024130471570Pseudomonas putida ND6 chromosome, complete genomeglycoside hydrolase family protein1e-0965.5
NC_014118:1171411:1179632117963211821632532Burkholderia sp. CCGE1002 chromosome chromosome 2, completechitinase-like protein3e-0964.3
NC_011094:638552:664550664550665164615Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme4e-0963.9
NC_018604:305957:314155314155314781627Brachyspira pilosicoli WesB complete genomeglycoside hydrolase family 195e-0963.5
NC_004578:4432983:444604244460424446575534Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative5e-0963.5
NC_004129:2234851:224007122400712240622552Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, lytic enzyme6e-0963.5
NC_015733:1976752:198241519824151982966552Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, lytic enzyme9e-0963.2
NC_013282:1804909:182501118250111825565555Cronobacter turicensis, complete genomehypothetical protein9e-0962.8
NC_009255:1369200:138805713880571388635579Burkholderia vietnamiensis G4 chromosome 2, complete sequenceglycoside hydrolase family protein1e-0862.4
NC_014121:1682638:169633316963331696881549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelytic enzyme2e-0862
NC_012214:1974500:198840819884081989031624Erwinia pyrifoliae Ep1/96, complete genomeLytic enzyme6e-0860.1
NC_016612:3314846:333598533359853336533549Klebsiella oxytoca KCTC 1686 chromosome, complete genomelytic enzyme1e-0759.3
NC_015761:1017301:102522610252261025840615Salmonella bongori NCTC 12419, complete genomebacteriophage protein1e-0758.9
NC_013282:1200993:122515912251591225785627Cronobacter turicensis, complete genomeUncharacterized protein HI14152e-0758.5
NC_014150:1497381:150134615013461501939594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-0758.2
NC_014150:1936154:193923519392351939828594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-0758.2
NC_014150:2560475:256367625636762564269594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 195e-0757.4
NC_009937:958576:961972961972962877906Azorhizobium caulinodans ORS 571, complete genomeputative chitinase7e-0756.6
NC_012660:4558122:457641545764154576948534Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage encoded lysozyme8e-0756.2
NC_014934:2223822:2233004223300422347071704Cellulophaga algicola DSM 14237 chromosome, complete genomepeptidoglycan-binding lysin domain protein8e-0756.2
NC_004578:5916711:5923177592317759242561080Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein8e-0756.2
NC_016047:345491:355177355177355635459Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeendopeptidase LytF1e-0655.8
NC_012731:2083650:211163421116342112260627Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycoside hydrolase1e-0655.5
NC_011601:2806392:281283928128392813465627Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendolysin1e-0655.5
NC_020301:853267:865370865370865978609Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein2e-0655.1
NC_011770:1431740:145211114521111452728618Pseudomonas aeruginosa LESB58, complete genomeCOG3179: Predicted chitinase3e-0654.7
NC_020181:5384015:539721353972135397842630Enterobacter aerogenes EA1509E, complete genomePhage endolysin4e-0654.3
NC_015377:34445:5180251802545612760Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencehypothetical protein3e-0654.3
NC_017047:1906000:191830019183001918926627Rahnella aquatilis HX2 chromosome, complete genomeputative endolysin3e-0654.3
NC_012725:97681:1109671109671138102844Burkholderia glumae BGR1 plasmid bglu_4p, complete sequencehypothetical protein3e-0654.3
NC_010397:1802724:1809368180936818107411374Mycobacterium abscessus chromosome Chromosome, complete sequenceBacteriophage protein3e-0654.3
NC_009648:1541699:156536715653671565993627Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative glycoside hydrolase4e-0653.9
NC_013850:2182337:220954522095452210171627Klebsiella variicola At-22 chromosome, complete genomeglycoside hydrolase family 194e-0653.9