Pre_GI: BLASTP Hits

Some Help

Query: NC_007333:39579:65942 Thermobifida fusca YX, complete genome

Start: 65942, End: 67549, Length: 1608

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014210:4377867:4395727439572743971721446Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, PucR family3e-1997.1
NC_007333:2093167:2096318209631820978771560Thermobifida fusca YX, complete genomehelix-turn-helix, Fis-type1e-1275.1
NC_010397:815549:8207628207628222821521Mycobacterium abscessus chromosome Chromosome, complete sequenceHypothetical peptidase5e-1169.7
NC_009142:6729512:6756728675672867581311404Saccharopolyspora erythraea NRRL 2338, complete genomeregulatory protein7e-1169.3
NC_014829:1475000:1487324148732414889401617Bacillus cellulosilyticus DSM 2522 chromosome, complete genometranscriptional regulator, CdaR9e-1168.9
NC_017955:3057592:3059221305922130607471527Modestobacter marinus, complete genomeCdaR family transcriptional regulator2e-1068.2
NC_009338:817854:8218748218748232381365Mycobacterium gilvum PYR-GCK chromosome, complete genometranscriptional regulator CdaR1e-1068.2
NC_015859:1069116:1082172108217210837971626Corynebacterium variabile DSM 44702 chromosome, complete genomeDNA-binding transcription regulator4e-0963.5
NC_011959:131800:1318001318001333351536Thermomicrobium roseum DSM 5159, complete genomehelix-turn-helix, Fis-type1e-0861.6
NC_014210:2638773:2655191265519126567531563Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, CdaR6e-0859.3
NC_008596:4043213:4043213404321340448051593Mycobacterium smegmatis str. MC2 155, complete genomeregulatory protein, putative1e-0758.5