Pre_GI: BLASTP Hits

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Query: NC_007333:2093167:2100900 Thermobifida fusca YX, complete genome

Start: 2100900, End: 2101133, Length: 234

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010612:681544:693693693693693977285Mycobacterium marinum M, complete genome7e-0752.8
NC_012522:5895946:5910225591022559116101386Rhodococcus opacus B4, complete genomephage integrase family protein2e-0651.6
NC_017186:9604427:9628953962895396301581206Amycolatopsis mediterranei S699 chromosome, complete genomephage integrase2e-0651.2
NC_014318:9604367:9628893962889396300981206Amycolatopsis mediterranei U32 chromosome, complete genomeputative phage integrase2e-0651.2
NC_013929:3600343:3617834361783436190571224Streptomyces scabiei 87.22 chromosome, complete genomeintegrase3e-0650.8
NC_012803:2195808:2235293223529322364801188Micrococcus luteus NCTC 2665, complete genomesite-specific recombinase, integrase family3e-0650.4
NC_014550:7560:2566025660270091350Arthrobacter arilaitensis Re117, complete genome3e-0650.4
NC_012803:691215:714743714743715681939Micrococcus luteus NCTC 2665, complete genomesite-specific recombinase, integrase family4e-0650.1
NC_008699:1816392:1833425183342518345611137Nocardioides sp. JS614, complete genomephage integrase family protein5e-0649.7
NC_017186:5586328:559468955946895595087399Amycolatopsis mediterranei S699 chromosome, complete genomephage integrase-like protein6e-0649.7
NC_014318:5586287:559464855946485595046399Amycolatopsis mediterranei U32 chromosome, complete genomephage integrase-like protein6e-0649.7