Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1842424 Thermobifida fusca YX, complete genome

Start: 1842424, End: 1843068, Length: 645

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:3117837:313282331328233133461639Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein, Cse2 family3e-54211
NC_014210:1588426:159014415901441590845702Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein, Cse2 family4e-51201
NC_013131:4422000:443203544320354432706672Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse2 family1e-45182
NC_019673:1988853:203988620398862040554669Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-33143
NC_006361:4574536:458842945884294589079651Nocardia farcinica IFM 10152, complete genomehypothetical protein2e-21102
NC_016109:603829:617984617984618586603Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein7e-1270.5
NC_008278:514600:524354524354524830477Frankia alni ACN14a, complete genomehypothetical protein8e-1063.9
NC_007164:775000:780959780959781594636Corynebacterium jeikeium K411, complete genomehypothetical protein5e-0857.8