Pre_GI: BLASTP Hits

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Query: NC_007333:1129826:1129826 Thermobifida fusca YX, complete genome

Start: 1129826, End: 1131904, Length: 2079

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009953:188000:2001412001412021802040Salinispora arenicola CNS-205 chromosome, complete genomecopper resistance D domain-containing protein9e-84311
NC_013093:1213908:1241312124131212433752064Actinosynnema mirum DSM 43827, complete genomecopper resistance D domain protein4e-81303
NC_007164:622000:6460956460956484132319Corynebacterium jeikeium K411, complete genomehypothetical protein6e-76285
NC_012704:1641684:1649517164951716517392223Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein3e-74280
NC_013174:2624365:2624365262436526264282064Jonesia denitrificans DSM 20603, complete genomecopper resistance D domain protein2e-66254
NC_016906:4123000:4143727414372741456611935Gordonia polyisoprenivorans VH2 chromosome, complete genomecytochrome c oxidase caa3 assembly factor-like protein2e-66254
NC_009806:35990:5287552875550942220Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completeputative copper resistance protein D7e-66252
NC_008726:3915979:3922513392251339244411929Mycobacterium vanbaalenii PYR-1, complete genomecopper resistance D domain protein1e-64248
NC_015859:2726414:2736432273643227383961965Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein8e-53209
NC_013441:2788806:2794162279416227961261965Gordonia bronchialis DSM 43247, complete genomeCytochrome c oxidase caa3-type, assembly factor CtaG-related protein1e-47191
NC_014158:73344:7711677116789571842Tsukamurella paurometabola DSM 20162 chromosome, complete genomeCytochrome c oxidase caa3-type, assembly factor CtaG-related protein2e-45184
NC_009342:135500:1589051589051609262022Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-45183
NC_009338:2925286:296893029689302969925996Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein1e-26121
NC_015671:255808:271179271179272162984Cellvibrio gilvus ATCC 13127 chromosome, complete genomeCytochrome c oxidase caa3-type, assembly factor CtaG-like protein2e-23111
NC_015312:61752:6766067660686911032Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecytochrome c oxidase caa3-type, assembly factor CtaG-like protein2e-1584.7
NC_014158:2561441:257776525777652578745981Tsukamurella paurometabola DSM 20162 chromosome, complete genomeCytochrome c oxidase caa3-type, assembly factor CtaG-related protein2e-1378.6
NC_016906:4562874:457917045791704580105936Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative integral membrane protein6e-1170.1