Pre_GI: BLASTP Hits

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Query: NC_007005:6056765:6063045 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 6063045, End: 6063770, Length: 726

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:3789661:380624638062463806971726Burkholderia gladioli BSR3 chromosome 1, complete sequenceDTDP-glucose 4,6-dehydratase7e-61233
NC_011146:3537546:354909635490963549833738Geobacter bemidjiensis Bem, complete genomeNAD-dependent epimerase/dehydratase2e-41168
NC_013510:747042:769273769273770103831Thermomonospora curvata DSM 43183, complete genomeNAD-dependent epimerase/dehydratase3e-32138
NC_008596:4196194:421615842161584216742585Mycobacterium smegmatis str. MC2 155, complete genomedTDP-glucose 4,6-dehydratase1e-25116
NC_018750:6869675:687330968733096874148840Streptomyces venezuelae ATCC 10712, complete genomedTDP-glucose 4,6-dehydratase3e-22105
NC_013729:1556922:157686615768661577777912Kribbella flavida DSM 17836, complete genomeNAD-dependent epimerase/dehydratase1e-1997.1
NC_007777:2964500:298875829887582989669912Frankia sp. CcI3, complete genomeNAD-dependent epimerase/dehydratase6e-0651.2