Pre_GI: BLASTP Hits

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Query: NC_006905:651732:658967 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 658967, End: 659185, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2402893:241142324114232411659237Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-37152
NC_012125:600586:607796607796608032237Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-37152
NC_011149:588895:596105596105596341237Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-37152
NC_011094:593100:600310600310600546237Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein9e-37152
NC_011083:654479:661689661689661925237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-36151
NC_016832:2363136:237245023724502372686237Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-36148
NC_016856:606742:614019614019614189171Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-26118