Pre_GI: BLASTP Hits

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Query: NC_006905:3780000:3787605 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 3787605, End: 3788144, Length: 540

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1143500:115174411517441152301558Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-61234
NC_009792:2688747:269733326973332697881549Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-59226
NC_002935:48687:587305873059365636Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein8e-30129
NC_014151:370882:391203391203391751549Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein2e-29128
NC_009342:135500:141293141293141868576Corynebacterium glutamicum R chromosome, complete genomehypothetical protein4e-26117
NC_013169:2423863:242922024292202429837618Kytococcus sedentarius DSM 20547, complete genomehypothetical protein1e-25116
NC_004193:3434015:343681834368183437330513Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-25114