Pre_GI: BLASTP Hits

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Query: NC_006905:368942:378809 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 378809, End: 379357, Length: 549

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1330066:134026213402621340810549Salmonella enterica subsp. enterica serovar Paratyphi C strainEndodeoxyribonuclease3e-104377
NC_020181:5130513:516336151633615163927567Enterobacter aerogenes EA1509E, complete genomehypothetical protein2e-60231
NC_011294:2053991:205712120571212057690570Salmonella enterica subsp. enterica serovar Enteritidis strphage protein1e-54212
NC_015968:3301958:331934933193493319915567Enterobacter asburiae LF7a chromosome, complete genomephage protein2e-53207
NC_015566:3659318:366820636682063668784579Serratia sp. AS12 chromosome, complete genomephage protein3e-53207
NC_020181:2097066:2114821211482121172682448Enterobacter aerogenes EA1509E, complete genomeExodeoxyribonuclease VIII1e-52205
NC_011205:2180598:218510821851082185677570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853endodeoxyribonuclease1e-52205
NC_011601:1269500:1269547126954712720182472Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeexonuclease3e-52204
NC_009801:1756610:1774599177459917770762478Escherichia coli E24377A, complete genomeexonuclease family protein7e-51199
NC_016612:3803130:3810509381050938126472139Klebsiella oxytoca KCTC 1686 chromosome, complete genomeexodeoxyribonuclease VIII7e-51199
CP002516:2305659:2308505230850523109822478Escherichia coli KO11, complete genomeExonuclease RNase T and DNA polymerase III6e-51199
NC_016902:2305659:2308505230850523109822478Escherichia coli KO11FL chromosome, complete genomeExonuclease RNase T and DNA polymerase III6e-51199
NC_010468:2265423:2265423226542322679002478Escherichia coli ATCC 8739, complete genomeExonuclease RNase T and DNA polymerase III6e-51199
NC_009801:1392696:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein6e-51199
NC_009801:1419324:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein6e-51199
NC_009778:959982:971269971269971871603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-49195
NC_011748:1408280:1409701140970114121722472Escherichia coli 55989, complete genomeputative exonuclease from phage origin3e-49194
CU928145:1408280:1409701140970114121722472Escherichia coli 55989 chromosome, complete genomeputative exonuclease from phage origin3e-49194
NC_011751:1859606:1882358188235818848292472Escherichia coli UMN026 chromosome, complete genomeputative exonuclease from phage origin8e-49192
NC_013716:2764550:277051627705162770989474Citrobacter rodentium ICC168, complete genomeputative prophage exonuclease7e-39159
NC_020211:2985157:298594629859462986506561Serratia marcescens WW4, complete genomeendodeoxyribonuclease4e-36150
NC_015590:1425628:143978914397891440379591Sinorhizobium meliloti AK83 chromosome 1, complete sequenceputative exonuclease4e-34144
NC_015914:279413:289850289850290365516Cyclobacterium marinum DSM 745 chromosome, complete genomeendodeoxyribonuclease5e-33140
NC_013508:2587913:261386226138622614467606Edwardsiella tarda EIB202, complete genomeexodeoxyribonuclease VIII3e-1581.6
NC_013971:335247:341046341046341210165Erwinia amylovora ATCC 49946 chromosome, complete genomephage protein4e-1270.9