Pre_GI: BLASTP Hits

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Query: NC_006905:368942:377324 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 377324, End: 377701, Length: 378

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:2529750:259384825938482594354507Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-39160
NC_013361:3287671:330093633009363301523588Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-29127
NC_013361:1558423:156453915645391565168630Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-28122
NC_011601:1039500:104623110462311046794564Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-27120
NC_011094:593100:604550604550605047498Salmonella enterica subsp. enterica serovar Schwarzengrund strEae protein5e-1889.7
NC_011205:609464:621303621303621884582Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Eae protein3e-1373.9
NC_009778:959982:973435973435974175741Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-0649.7