Pre_GI: BLASTP Hits

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Query: NC_006905:326517:326517 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 326517, End: 327023, Length: 507

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:338910:341201341201341659459Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-85314
NC_007952:1934249:195050719505071950956450Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein8e-31132
NC_002947:4604582:461314246131424613573432Pseudomonas putida KT2440, complete genomehypothetical protein6e-1890.1
NC_016514:2713834:275261027526102753155546Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-1373.6
NC_013956:2592378:260898126089812609421441Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-1168.9
NC_014121:1589389:159116215911621591539378Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-1167
NC_016816:1852659:186425518642551864695441Pantoea ananatis LMG 5342, complete genomehypothetical protein7e-1166.6
NC_013956:1207500:122937212293721229809438Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-0960.8
NC_014121:3188928:320461732046173205015399Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-0650.8
NC_012962:3463644:348923134892313489656426Photorhabdus asymbiotica, complete genomehypothetical protein api909e-0649.7