Pre_GI: BLASTP Hits

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Query: NC_006905:2805877:2827581 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2827581, End: 2828702, Length: 1122

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CP002185:2889656:2909880290988029110011122Escherichia coli W, complete genomefused chorismate mutase T/prephenate dehydrogenase0699
CU928160:2785792:2806014280601428071351122Escherichia coli IAI1 chromosome, complete genomefused chorismate mutase T ; prephenate dehydrogenase0697
NC_009648:3192483:3213116321311632142371122Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomebifunctional chorismate mutase/prephenate dehydrogenase0667
NC_012917:3565268:3568274356827435693951122Pectobacterium carotovorum subsp. carotovorum PC1, complete genomechorismate mutase0647
NC_009052:1394000:1395253139525313964041152Shewanella baltica OS155, complete genomechorismate mutase2e-116419
NC_009665:1495473:1497975149797514991261152Shewanella baltica OS185 chromosome, complete genomebifunctional chorismate mutase/prephenate dehydrogenase3e-116418
NC_016901:1527877:1529610152961015307491140Shewanella baltica OS678 chromosome, complete genomechorismate mutase7e-116417
NC_012913:626449:6504936504936516171125Aggregatibacter aphrophilus NJ8700, complete genomechorismate mutase/prephenate dehydrogenase9e-114410
NC_019977:253895:2571892571892584901302Methanomethylovorans hollandica DSM 15978, complete genomeprephenate dehydrogenase1e-28127
NC_007955:2074844:2098171209817120994841314Methanococcoides burtonii DSM 6242, complete genomePrephenate dehydrogenase1e-27124
NC_008554:4586543:460957746095774610305729Syntrophobacter fumaroxidans MPOB, complete genomePrephenate dehydrogenase8e-26118
NC_009515:616432:6196606196606209701311Methanobrevibacter smithii ATCC 35061, complete genomeprephenate dehydrogenase4e-2099.4
NC_013741:1304000:1307226130722613090851860Archaeoglobus profundus DSM 5631, complete genomeprephenate dehydratase2e-1273.9
NC_003106:2272313:2278892227889222799171026Sulfolobus tokodaii str. 7, complete genomehypothetical protein6e-1272
NC_007181:141299:1467011467011477261026Sulfolobus acidocaldarius DSM 639, complete genomechorismate mutase/prephenate dehydrogenase4e-1169.3
NC_015518:1095879:1107012110701211080641053Acidianus hospitalis W1 chromosome, complete genomechorismate mutase1e-1067.8
NC_015164:3431279:343127934312793432052774Bacteroides salanitronis DSM 18170 chromosome, complete genomePrephenate dehydrogenase1e-0964.7
NC_009440:1810301:1820118182011818211521035Metallosphaera sedula DSM 5348 chromosome, complete genomechorismate mutase5e-0962.4
NC_012588:1655615:1668444166844416694841041Sulfolobus islandicus M.14.25 chromosome, complete genomechorismate mutase1e-0860.8
NC_012632:1785210:1794342179434217953821041Sulfolobus islandicus M.16.27 chromosome, complete genomechorismate mutase1e-0860.8
NC_012726:1685442:1694574169457416956141041Sulfolobus islandicus M.16.4 chromosome, complete genomechorismate mutase1e-0860.8
NC_017275:1705827:1718656171865617196961041Sulfolobus islandicus HVE10/4 chromosome, complete genomechorismate mutase1e-0860.8
NC_015684:3340519:336564733656473366609963Oligotropha carboxidovorans OM5 chromosome, complete genomearogenate dehydrogenase3e-0860.1
NC_004663:5099845:510703651070365107809774Bacteroides thetaiotaomicron VPI-5482, complete genomechorismate mutase/prephenate dehydratase (tyrA)2e-0757
NC_008701:1607419:162212516221251622877753Pyrobaculum islandicum DSM 4184, complete genomePrephenate dehydrogenase5e-0652.4