Pre_GI: BLASTP Hits

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Query: NC_006905:2175361:2189997 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2189997, End: 2191076, Length: 1080

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1693774:1702137170213717032161080Salmonella enterica subsp. enterica serovar Paratyphi C strainO-antigen polymerase1e-165582
NC_007517:1468719:1487369148736914884871119Geobacter metallireducens GS-15, complete genomehypothetical protein2e-1273.6
NC_013410:3280039:3314005331400533150811077Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein5e-1168.9